RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ANKS1AQ92625 1134 aa23.53■■□□□ 1.36
SF1-213ENST00000472725 PNMA3Q9UL41 463 aa23.53■■□□□ 1.36
SF1-213ENST00000472725 STX8Q9UNK0 236 aa23.53■■□□□ 1.36
SF1-213ENST00000472725 HMGB1P09429 215 aaKnown RBP23.52■■□□□ 1.36
SF1-213ENST00000472725 CLEC10AQ8IUN9 316 aa23.52■■□□□ 1.36
SF1-213ENST00000472725 FAM43AQ8N2R8 423 aa23.52■■□□□ 1.36
SF1-213ENST00000472725 ZSCAN10Q96SZ4 725 aaPredicted RBP23.52■■□□□ 1.36
SF1-213ENST00000472725 UBAC1Q9BSL1 405 aa23.52■■□□□ 1.36
SF1-213ENST00000472725 RNF186Q9NXI6 227 aa23.52■■□□□ 1.36
SF1-213ENST00000472725 TAF6LQ9Y6J9 622 aa23.52■■□□□ 1.36
SF1-213ENST00000472725 PDHXO00330 501 aa23.51■■□□□ 1.35
SF1-213ENST00000472725 TOP1P11387 765 aaKnown RBP23.51■■□□□ 1.35
SF1-213ENST00000472725 SART3Q15020 963 aaKnown RBP23.51■■□□□ 1.35
SF1-213ENST00000472725 MB21D2Q8IYB1 491 aaPredicted RBP23.51■■□□□ 1.35
SF1-213ENST00000472725 WDR46O15213 610 aaKnown RBP23.5■■□□□ 1.35
SF1-213ENST00000472725 OSBPP22059 807 aa23.5■■□□□ 1.35
SF1-213ENST00000472725 MCM5P33992 734 aa23.5■■□□□ 1.35
SF1-213ENST00000472725 NOM1Q5C9Z4 860 aaKnown RBP23.5■■□□□ 1.35
SF1-213ENST00000472725 NEK1Q96PY6 1258 aa23.5■■□□□ 1.35
SF1-213ENST00000472725 PARK7Q99497 189 aaKnown RBP23.5■■□□□ 1.35
SF1-213ENST00000472725 ZFYVE28Q9HCC9 887 aa23.5■■□□□ 1.35
SF1-213ENST00000472725 WDR19Q8NEZ3 1342 aa23.5■■□□□ 1.35
SF1-213ENST00000472725 ERICH2A1L162 156 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L15C9J2P7 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L13C9JLJ4 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L11C9JVI0 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L18D6R9N7 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L22D6RA61 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L17D6RBQ6 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L19D6RCP7 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L20D6RJB6 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 F5H6K3 240 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 NMT2O60551 498 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 VCAM1P19320 739 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 KLRC3Q07444 240 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 USP17L24Q0WX57 530 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 TAF1CQ15572 869 aaPredicted RBP23.49■■□□□ 1.35
SF1-213ENST00000472725 ZYXQ15942 572 aaKnown RBP23.49■■□□□ 1.35
SF1-213ENST00000472725 RCSD1Q6JBY9 416 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 RASEFQ8IZ41 740 aa23.49■■□□□ 1.35
SF1-213ENST00000472725 PSMA5P28066 241 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 ANAPC15P60006 121 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 TREML2Q5T2D2 321 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 CYB5R4Q7L1T6 521 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 NKX2-3Q8TAU0 364 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 GTF3C2Q8WUA4 911 aaPredicted RBP23.48■■□□□ 1.35
SF1-213ENST00000472725 TMEM87BQ96K49 555 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 TMEM47Q9BQJ4 181 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 SNX14Q9Y5W7 946 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 TNKSO95271 1327 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 CEP350Q5VT06 3117 aa23.48■■□□□ 1.35
SF1-213ENST00000472725 TRPA1O75762 1119 aa23.47■■□□□ 1.35
SF1-213ENST00000472725 CATSPERGQ6ZRH7 1159 aa23.47■■□□□ 1.35
SF1-213ENST00000472725 TMTC2Q8N394 836 aa23.47■■□□□ 1.35
SF1-213ENST00000472725 ENAHQ8N8S7 591 aaPredicted RBP23.47■■□□□ 1.35
SF1-213ENST00000472725 GMCL1Q96IK5 515 aa23.47■■□□□ 1.35
SF1-213ENST00000472725 NDUFB10O96000 172 aa23.46■■□□□ 1.35
SF1-213ENST00000472725 IRX3P78415 501 aaPredicted RBP23.46■■□□□ 1.35
SF1-213ENST00000472725 SEC23AQ15436 765 aa23.46■■□□□ 1.35
SF1-213ENST00000472725 DHX32Q7L7V1 743 aaKnown RBP23.46■■□□□ 1.35
SF1-213ENST00000472725 MYPNQ86TC9 1320 aa23.46■■□□□ 1.35
SF1-213ENST00000472725 LRRC47Q8N1G4 583 aaKnown RBP23.46■■□□□ 1.35
SF1-213ENST00000472725 ZKSCAN3Q9BRR0 538 aa23.46■■□□□ 1.35
SF1-213ENST00000472725 RPAP3Q9H6T3 665 aaPredicted RBP23.46■■□□□ 1.35
SF1-213ENST00000472725 IFIT3O14879 490 aaKnown RBP23.45■■□□□ 1.34
SF1-213ENST00000472725 TLR2O60603 784 aa23.45■■□□□ 1.34
SF1-213ENST00000472725 GCLCP48506 637 aaPredicted RBP23.45■■□□□ 1.34
SF1-213ENST00000472725 DGKZQ13574 1117 aa23.45■■□□□ 1.34
SF1-213ENST00000472725 IFIT1BQ5T764 474 aaKnown RBP23.45■■□□□ 1.34
SF1-213ENST00000472725 SLFN13Q68D06 897 aa23.45■■□□□ 1.34
SF1-213ENST00000472725 IL17RAQ96F46 866 aa23.45■■□□□ 1.34
SF1-213ENST00000472725 TM6SF1Q9BZW5 370 aa23.45■■□□□ 1.34
SF1-213ENST00000472725 ASCC2Q9H1I8 757 aaPredicted RBP23.45■■□□□ 1.34
SF1-213ENST00000472725 KAT14Q9H8E8 782 aa23.45■■□□□ 1.34
SF1-213ENST00000472725 PRC1O43663 620 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 HSPA1AP0DMV8 641 aaKnown RBP23.44■■□□□ 1.34
SF1-213ENST00000472725 HSPA1BP0DMV9 641 aaKnown RBP23.44■■□□□ 1.34
SF1-213ENST00000472725 ANTXR2P58335 489 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 CRHR2Q13324 411 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 ADCK5Q3MIX3 580 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 KIAA1755Q5JYT7 1200 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 LBX2Q6XYB7 198 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 IGDCC4Q8TDY8 1250 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 DCAF4Q8WV16 495 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 HOXC10Q9NYD6 342 aa23.44■■□□□ 1.34
SF1-213ENST00000472725 PLA2G6O60733 806 aa23.43■■□□□ 1.34
SF1-213ENST00000472725 SEC24BO95487 1268 aa23.43■■□□□ 1.34
SF1-213ENST00000472725 LIFRP42702 1097 aa23.43■■□□□ 1.34
SF1-213ENST00000472725 EXOSC10Q01780 885 aaKnown RBP23.43■■□□□ 1.34
SF1-213ENST00000472725 COG2Q14746 738 aa23.43■■□□□ 1.34
SF1-213ENST00000472725 WTAPQ15007 396 aa23.43■■□□□ 1.34
SF1-213ENST00000472725 TMEM67Q5HYA8 995 aa23.43■■□□□ 1.34
SF1-213ENST00000472725 SPICE1Q8N0Z3 855 aa23.43■■□□□ 1.34
SF1-213ENST00000472725 SMCR8Q8TEV9 937 aaPredicted RBP23.43■■□□□ 1.34
SF1-213ENST00000472725 ADGRA2Q96PE1 1338 aa23.42■■□□□ 1.34
SF1-213ENST00000472725 BMP3P12645 472 aa23.42■■□□□ 1.34
SF1-213ENST00000472725 SLC1A4P43007 532 aa23.42■■□□□ 1.34
SF1-213ENST00000472725 CTCFP49711 727 aaPredicted RBP23.42■■□□□ 1.34
SF1-213ENST00000472725 BLOC1S2Q6QNY1 142 aa23.42■■□□□ 1.34
SF1-213ENST00000472725 FBXL16Q8N461 479 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms