RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SUCOQ9UBS9 1254 aaKnown RBP8.94□□□□□ -0.98
CLK1-209ENST00000472679 CHMP4BP1P59074 171 aa8.93□□□□□ -0.98
CLK1-209ENST00000472679 NETO1Q8TDF5 533 aa8.93□□□□□ -0.98
CLK1-209ENST00000472679 HNRNPLLQ8WVV9 542 aaKnown RBP8.93□□□□□ -0.98
CLK1-209ENST00000472679 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
CLK1-209ENST00000472679 ASPNQ9BXN1 380 aa8.93□□□□□ -0.98
CLK1-209ENST00000472679 ZNF214Q9UL59 606 aaPredicted RBP8.93□□□□□ -0.98
CLK1-209ENST00000472679 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
CLK1-209ENST00000472679 GRIK1P39086 918 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 KIR3DL1P43629 444 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 CD97P48960 835 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 PMS1P54277 932 aaKnown RBP8.92□□□□□ -0.98
CLK1-209ENST00000472679 ZMYM1Q5SVZ6 1142 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 CDKAL1Q5VV42 579 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
CLK1-209ENST00000472679 ANKS3Q6ZW76 656 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 DTWD2Q8NBA8 298 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 DHRS1Q96LJ7 313 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 ACTR10Q9NZ32 417 aa8.92□□□□□ -0.98
CLK1-209ENST00000472679 PPP1R1BQ9UD71 204 aaPredicted RBP8.92□□□□□ -0.98
CLK1-209ENST00000472679 KLF4O43474 513 aa8.91□□□□□ -0.98
CLK1-209ENST00000472679 STK10O94804 968 aaKnown RBP8.91□□□□□ -0.98
CLK1-209ENST00000472679 TP53P04637 393 aaPredicted RBP8.91□□□□□ -0.98
CLK1-209ENST00000472679 RNF4P78317 190 aa8.91□□□□□ -0.98
CLK1-209ENST00000472679 SF3A1Q15459 793 aaKnown RBP8.91□□□□□ -0.98
CLK1-209ENST00000472679 IFI16Q16666 785 aaKnown RBP8.91□□□□□ -0.98
CLK1-209ENST00000472679 TNNI3KQ59H18 835 aa8.91□□□□□ -0.98
CLK1-209ENST00000472679 MICAL1Q8TDZ2 1067 aa8.91□□□□□ -0.98
CLK1-209ENST00000472679 ST14Q9Y5Y6 855 aa8.91□□□□□ -0.98
CLK1-209ENST00000472679 SNW1Q13573 536 aaKnown RBP8.9□□□□□ -0.98
CLK1-209ENST00000472679 NBPF9Q3BBW0 867 aa8.9□□□□□ -0.98
CLK1-209ENST00000472679 AXDND1Q5T1B0 1012 aaPredicted RBP8.9□□□□□ -0.98
CLK1-209ENST00000472679 KLHL6Q8WZ60 621 aa8.9□□□□□ -0.98
CLK1-209ENST00000472679 HSPA12BQ96MM6 686 aa8.9□□□□□ -0.98
CLK1-209ENST00000472679 MKRN2Q9H000 416 aaKnown RBP8.9□□□□□ -0.98
CLK1-209ENST00000472679 SLC12A7Q9Y666 1083 aa8.9□□□□□ -0.98
CLK1-209ENST00000472679 WASH4PA8MWX3 477 aa8.89□□□□□ -0.99
CLK1-209ENST00000472679 SPINK2P20155 84 aa8.89□□□□□ -0.99
CLK1-209ENST00000472679 BNIP3Q12983 259 aa8.89□□□□□ -0.99
CLK1-209ENST00000472679 GNPTABQ3T906 1256 aa8.89□□□□□ -0.99
CLK1-209ENST00000472679 LARP1BQ659C4 914 aaKnown RBP8.89□□□□□ -0.99
CLK1-209ENST00000472679 DTX1Q86Y01 620 aa8.89□□□□□ -0.99
CLK1-209ENST00000472679 CELF2-AS1Q8N7Q2 184 aa8.89□□□□□ -0.99
CLK1-209ENST00000472679 DUSP15Q9H1R2 295 aaPredicted RBP8.89□□□□□ -0.99
CLK1-209ENST00000472679 PHAXQ9H814 394 aaKnown RBP8.89□□□□□ -0.99
CLK1-209ENST00000472679 TMEM265A0A087WTH1 108 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 SHISA3A0PJX4 238 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 KIAA1324LA8MWY0 1029 aaPredicted RBP8.88□□□□□ -0.99
CLK1-209ENST00000472679 B2RBV5 119 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 H3BS24 57 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 ADAMTS4O75173 837 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 CD96P40200 585 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 DCAF15Q66K64 600 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 TMC3Q7Z5M5 1100 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 CCDC144CPQ8IYA2 1237 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 PIWIL2Q8TC59 973 aaKnown RBP8.88□□□□□ -0.99
CLK1-209ENST00000472679 DRC1Q96MC2 740 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 SEMA3GQ9NS98 782 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
CLK1-209ENST00000472679 KCNH3Q9ULD8 1083 aa8.88□□□□□ -0.99
CLK1-209ENST00000472679 SHOXO15266 292 aa8.87□□□□□ -0.99
CLK1-209ENST00000472679 SLC7A5Q01650 507 aa8.87□□□□□ -0.99
CLK1-209ENST00000472679 RBL2Q08999 1139 aa8.87□□□□□ -0.99
CLK1-209ENST00000472679 AUHQ13825 339 aaKnown RBP8.87□□□□□ -0.99
CLK1-209ENST00000472679 VHLLQ6RSH7 139 aa8.87□□□□□ -0.99
CLK1-209ENST00000472679 PRDM14Q9GZV8 571 aa8.87□□□□□ -0.99
CLK1-209ENST00000472679 ST7Q9NRC1 585 aa8.87□□□□□ -0.99
CLK1-209ENST00000472679 SNX11Q9Y5W9 270 aa8.87□□□□□ -0.99
CLK1-209ENST00000472679 SRFP11831 508 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 CLCN7P51798 805 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 AOC3Q16853 763 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 KIAA1211LQ6NV74 962 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 C6orf15Q6UXA7 325 aaPredicted RBP8.86□□□□□ -0.99
CLK1-209ENST00000472679 NFXL1Q6ZNB6 911 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 WFDC3Q8IUB2 231 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 BCL7CQ8WUZ0 217 aaPredicted RBP8.86□□□□□ -0.99
CLK1-209ENST00000472679 UBE2FQ969M7 185 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 ARMC5Q96C12 935 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 DNAJC2Q99543 621 aaKnown RBP8.86□□□□□ -0.99
CLK1-209ENST00000472679 ZSWIM5Q9P217 1185 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 MINPP1Q9UNW1 487 aa8.86□□□□□ -0.99
CLK1-209ENST00000472679 R3HCC1Q9Y3T6 440 aaKnown RBP8.86□□□□□ -0.99
CLK1-209ENST00000472679 PITPNM2Q9BZ72 1349 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 CBFA2T2O43439 604 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 HYAL3O43820 417 aaPredicted RBP8.85□□□□□ -0.99
CLK1-209ENST00000472679 PRNPP04156 253 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 PRKCQQ04759 706 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 RAB33AQ14088 237 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 BBS9Q3SYG4 887 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 SPRED2Q7Z698 418 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 CKAP2LQ8IYA6 745 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 C7orf61Q8IZ16 206 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 HRASLS5Q96KN8 279 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 GPR62Q9BZJ7 368 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 ATP13A1Q9HD20 1204 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 PCMTD2Q9NV79 361 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 CCDC39Q9UFE4 941 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 FBXL21Q9UKT6 434 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 VAV3Q9UKW4 847 aa8.85□□□□□ -0.99
CLK1-209ENST00000472679 ZNF451Q9Y4E5 1061 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms