RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 ZNF654Q8IZM8 581 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 NOA1Q8NC60 698 aaKnown RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 ANKRD20A12PQ8NF67 263 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 NACAP1Q9BZK3 213 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 RWDD2AQ9UIY3 292 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 LRRIQ3A6PVS8 624 aaPredicted RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 ABL1P00519 1130 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 TFRCP02786 760 aaKnown RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 CASP1P29466 404 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 KRT2P35908 639 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 CCT6AP40227 531 aaKnown RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 AARSP49588 968 aaKnown RBP eCLIP16.79■□□□□ 0.28
FXR1-209ENST00000472339 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 CTSWP56202 376 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 CTR9Q6PD62 1173 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 NUP88Q99567 741 aaPredicted RBP16.79■□□□□ 0.28
FXR1-209ENST00000472339 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 ARMT1Q9H993 441 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 MYH3P11055 1940 aa16.79■□□□□ 0.28
FXR1-209ENST00000472339 AKAP17AQ02040 695 aaKnown RBP16.78■□□□□ 0.28
FXR1-209ENST00000472339 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 RNF41Q9H4P4 317 aaPredicted RBP16.78■□□□□ 0.28
FXR1-209ENST00000472339 TOMM22Q9NS69 142 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 ARAP2Q8WZ64 1704 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 MAP9Q49MG5 647 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 SPATA5Q8NB90 893 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 LPIN2Q92539 896 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 PHF20Q9BVI0 1012 aa16.78■□□□□ 0.28
FXR1-209ENST00000472339 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
FXR1-209ENST00000472339 FAM205CA6NFA0 338 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 PSMD14O00487 310 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 KRT9P35527 623 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 MAGEA9P43362 315 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 TDO2P48775 406 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 USP14P54578 494 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
FXR1-209ENST00000472339 NCAPH2Q6IBW4 605 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 LRRC31Q6UY01 552 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 GIGYF2Q6Y7W6 1299 aaKnown RBP16.77■□□□□ 0.28
FXR1-209ENST00000472339 SYNE4Q8N205 404 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 PYM1Q9BRP8 204 aaKnown RBP16.77■□□□□ 0.28
FXR1-209ENST00000472339 FAM204AQ9H8W3 233 aa16.77■□□□□ 0.28
FXR1-209ENST00000472339 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
FXR1-209ENST00000472339 PNPLA7Q6ZV29 1317 aa16.77■□□□□ 0.27
FXR1-209ENST00000472339 RNF225M0QZC1 329 aaPredicted RBP16.76■□□□□ 0.27
FXR1-209ENST00000472339 TCP11X2Q5H9J9 407 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 VPS16Q9H269 839 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 HAUS4Q9H6D7 363 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 EPN1Q9Y6I3 576 aaPredicted RBP16.76■□□□□ 0.27
FXR1-209ENST00000472339 BCORQ6W2J9 1755 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 NDUFA10O95299 355 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 FGFR2P21802 821 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 CDC25AP30304 524 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 NOP2P46087 812 aaKnown RBP16.76■□□□□ 0.27
FXR1-209ENST00000472339 PAK1Q13153 545 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
FXR1-209ENST00000472339 FOXR1Q6PIV2 292 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 NLRP10Q86W26 655 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 SHISA4Q96DD7 197 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 UBAC1Q9BSL1 405 aa16.76■□□□□ 0.27
FXR1-209ENST00000472339 XDHP47989 1333 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 TARSL2A2RTX5 802 aaKnown RBP16.75■□□□□ 0.27
FXR1-209ENST00000472339 KCNJ18B7U540 433 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 RNF40O75150 1001 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 PHACTR2O75167 634 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 KCNJ12Q14500 433 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 PKN1Q16512 942 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 EARS2Q5JPH6 523 aaKnown RBP16.75■□□□□ 0.27
FXR1-209ENST00000472339 AFAP1L1Q8TED9 768 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 BRMS1Q9HCU9 246 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 TAB2Q9NYJ8 693 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 IQSEC3Q9UPP2 1182 aaPredicted RBP16.75■□□□□ 0.27
FXR1-209ENST00000472339 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 PRPF3O43395 683 aaKnown RBP16.75■□□□□ 0.27
FXR1-209ENST00000472339 PRKAB2O43741 272 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 GTPBP6O43824 516 aaPredicted RBP16.75■□□□□ 0.27
FXR1-209ENST00000472339 E2F4Q16254 413 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
FXR1-209ENST00000472339 REXO2Q9Y3B8 237 aaKnown RBP16.75■□□□□ 0.27
FXR1-209ENST00000472339 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
FXR1-209ENST00000472339 SYF2O95926 243 aaKnown RBP16.74■□□□□ 0.27
FXR1-209ENST00000472339 ATP2C1P98194 919 aaPredicted RBP16.74■□□□□ 0.27
FXR1-209ENST00000472339 SEC23AQ15436 765 aa16.74■□□□□ 0.27
FXR1-209ENST00000472339 LCORLQ8N3X6 602 aa16.74■□□□□ 0.27
FXR1-209ENST00000472339 NELFBQ8WX92 580 aa16.74■□□□□ 0.27
FXR1-209ENST00000472339 DDX17Q92841 729 aaKnown RBP16.74■□□□□ 0.27
FXR1-209ENST00000472339 RMND1Q9NWS8 449 aa16.74■□□□□ 0.27
FXR1-209ENST00000472339 DISP2A7MBM2 1401 aa16.74■□□□□ 0.27
FXR1-209ENST00000472339 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
FXR1-209ENST00000472339 EIF3CLB5ME19 914 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms