RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 HTTP42858 3142 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
SMC4-213ENST00000472282 ATP5JP18859 108 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 MX1P20591 662 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 DYNLL1P63167 89 aaKnown RBP11.06□□□□□ -0.64
SMC4-213ENST00000472282 JAG1P78504 1218 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 KMT5BQ4FZB7 885 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 NAA16Q6N069 864 aaPredicted RBP11.06□□□□□ -0.64
SMC4-213ENST00000472282 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
SMC4-213ENST00000472282 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 ARMC5Q96C12 935 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.06□□□□□ -0.644e-34■■■■■ 131.8
SMC4-213ENST00000472282 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
SMC4-213ENST00000472282 TRIM75PA6NK02 468 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 GOLIM4O00461 696 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 CXCL11O14625 94 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 CTNND1O60716 968 aaKnown RBP11.05□□□□□ -0.64
SMC4-213ENST00000472282 SHROOM1Q2M3G4 852 aaPredicted RBP11.05□□□□□ -0.64
SMC4-213ENST00000472282 GADL1Q6ZQY3 521 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 MAPKAPK5Q8IW41 473 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 TGFBRAP1Q8WUH2 860 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 ZNF775Q96BV0 537 aaPredicted RBP11.05□□□□□ -0.64
SMC4-213ENST00000472282 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
SMC4-213ENST00000472282 ZNF333Q96JL9 665 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 HAUS7Q99871 368 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 DNAJC18Q9H819 358 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 PICK1Q9NRD5 415 aa11.05□□□□□ -0.64
SMC4-213ENST00000472282 ERC2O15083 957 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 IDH1O75874 414 aaKnown RBP11.04□□□□□ -0.64
SMC4-213ENST00000472282 MYCP01106 439 aaPredicted RBP11.04□□□□□ -0.64
SMC4-213ENST00000472282 BCRP11274 1271 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 EN2P19622 333 aaPredicted RBP11.04□□□□□ -0.64
SMC4-213ENST00000472282 PDE1AP54750 535 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 SLC4A8Q2Y0W8 1093 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 TREML2Q5T2D2 321 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 CENPQQ7L2Z9 268 aaPredicted RBP11.04□□□□□ -0.64
SMC4-213ENST00000472282 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 TMEM134Q9H6X4 195 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 FLT1P17948 1338 aa11.04□□□□□ -0.64
SMC4-213ENST00000472282 GLRX3O76003 335 aaKnown RBP11.03□□□□□ -0.64
SMC4-213ENST00000472282 MAP4K4O95819 1239 aaPredicted RBP11.03□□□□□ -0.64
SMC4-213ENST00000472282 CYP7A1P22680 504 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 CAP2P40123 477 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 PSMC4P43686 418 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
SMC4-213ENST00000472282 SLC9C1Q4G0N8 1177 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 MIGA1Q8NAN2 632 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 PARK7Q99497 189 aaKnown RBP11.03□□□□□ -0.64
SMC4-213ENST00000472282 PPP4R2Q9NY27 417 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 SAP30BPQ9UHR5 308 aaKnown RBP11.03□□□□□ -0.64
SMC4-213ENST00000472282 PALD1Q9ULE6 856 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 ADGRG1Q9Y653 693 aa11.03□□□□□ -0.64
SMC4-213ENST00000472282 BAG3O95817 575 aa11.02□□□□□ -0.65
SMC4-213ENST00000472282 MAP3K12Q12852 859 aa11.02□□□□□ -0.65
SMC4-213ENST00000472282 SPP2Q13103 211 aa11.02□□□□□ -0.65
SMC4-213ENST00000472282 KIF22Q14807 665 aa11.02□□□□□ -0.65
SMC4-213ENST00000472282 FASTKD5Q7L8L6 764 aaKnown RBP11.02□□□□□ -0.65
SMC4-213ENST00000472282 MAGEB6Q8N7X4 407 aa11.02□□□□□ -0.65
SMC4-213ENST00000472282 NOL10Q9BSC4 688 aaKnown RBP11.02□□□□□ -0.65
SMC4-213ENST00000472282 SRRDQ9UH36 339 aa11.02□□□□□ -0.65
SMC4-213ENST00000472282 GABRQQ9UN88 632 aa11.02□□□□□ -0.65
SMC4-213ENST00000472282 GDF11O95390 407 aa11.01□□□□□ -0.65
SMC4-213ENST00000472282 ARHGEF6Q15052 776 aa11.01□□□□□ -0.65
SMC4-213ENST00000472282 MTFR1Q15390 333 aa11.01□□□□□ -0.65
SMC4-213ENST00000472282 PI4KBQ9UBF8 816 aa11.01□□□□□ -0.65
SMC4-213ENST00000472282 HERC5Q9UII4 1024 aaKnown RBP11.01□□□□□ -0.65
SMC4-213ENST00000472282 AGTPBP1Q9UPW5 1226 aa11.01□□□□□ -0.65
SMC4-213ENST00000472282 MYPNQ86TC9 1320 aa11.01□□□□□ -0.65
SMC4-213ENST00000472282 CENPFP49454 3210 aa11.01□□□□□ -0.65
SMC4-213ENST00000472282 ALPK3Q96L96 1907 aa11□□□□□ -0.65
SMC4-213ENST00000472282 RCCD1A6NED2 376 aa11□□□□□ -0.65
SMC4-213ENST00000472282 PEX10O60683 326 aa11□□□□□ -0.65
SMC4-213ENST00000472282 FMNL1O95466 1100 aaPredicted RBP11□□□□□ -0.65
SMC4-213ENST00000472282 PDE6AP16499 860 aa11□□□□□ -0.65
SMC4-213ENST00000472282 HMGCS2P54868 508 aa11□□□□□ -0.65
SMC4-213ENST00000472282 PRKCZQ05513 592 aa11□□□□□ -0.65
SMC4-213ENST00000472282 SLFNL1Q499Z3 407 aa11□□□□□ -0.65
SMC4-213ENST00000472282 BLOC1S3Q6QNY0 202 aa11□□□□□ -0.65
SMC4-213ENST00000472282 METTL16Q86W50 562 aaKnown RBP11□□□□□ -0.65
SMC4-213ENST00000472282 SKAP1Q86WV1 359 aa11□□□□□ -0.65
SMC4-213ENST00000472282 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
SMC4-213ENST00000472282 ZNF280CQ8ND82 737 aa11□□□□□ -0.65
SMC4-213ENST00000472282 DHX36Q9H2U1 1008 aaKnown RBP11□□□□□ -0.65
SMC4-213ENST00000472282 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
SMC4-213ENST00000472282 SLC45A1Q9Y2W3 748 aa11□□□□□ -0.65
SMC4-213ENST00000472282 PARP14Q460N5 1801 aa11□□□□□ -0.65
SMC4-213ENST00000472282 USP17L5A8MUK1 530 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 IGSF3O75054 1194 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 GNRH1P01148 92 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 CHGBP05060 677 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 ADD2P35612 726 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 PRMT2P55345 433 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms