RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 TSEN34Q9BSV6 310 aaKnown RBP12.65□□□□□ -0.38
SPC25-203ENST00000472216 LOC400499M0QZD8 3231 aa12.65□□□□□ -0.38
SPC25-203ENST00000472216 COL4A4P53420 1690 aaPredicted RBP12.64□□□□□ -0.39
SPC25-203ENST00000472216 PTPN13Q12923 2485 aa12.64□□□□□ -0.39
SPC25-203ENST00000472216 IGHA2P01877 340 aa12.64□□□□□ -0.39
SPC25-203ENST00000472216 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
SPC25-203ENST00000472216 NPLOC4Q8TAT6 608 aa12.64□□□□□ -0.39
SPC25-203ENST00000472216 CLDND1Q9NY35 253 aa12.64□□□□□ -0.39
SPC25-203ENST00000472216 PHIPQ8WWQ0 1821 aa12.64□□□□□ -0.39
SPC25-203ENST00000472216 PTPRFP10586 1907 aa12.64□□□□□ -0.39
SPC25-203ENST00000472216 MYO18BQ8IUG5 2567 aa12.64□□□□□ -0.39
SPC25-203ENST00000472216 DSPP15924 2871 aaKnown RBP12.63□□□□□ -0.39
SPC25-203ENST00000472216 CEP295Q9C0D2 2601 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 PGK1P00558 417 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 CDK7P50613 346 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 ACLYP53396 1101 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
SPC25-203ENST00000472216 DCTN1Q14203 1278 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 HERC6Q8IVU3 1022 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 GPR161Q8N6U8 529 aaKnown RBP12.63□□□□□ -0.39
SPC25-203ENST00000472216 HIPK3Q9H422 1215 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
SPC25-203ENST00000472216 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
SPC25-203ENST00000472216 LOC730098B7Z3J9 87 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 NCK2O43639 380 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 PTPREP23469 700 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPC25-203ENST00000472216 CCL23P55773 120 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 HERVK_113P62684 666 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
SPC25-203ENST00000472216 NEUROD1Q13562 356 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 TTLL4Q14679 1199 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 COL19A1Q14993 1142 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 PTPROQ16827 1216 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 SOWAHCQ53LP3 525 aaPredicted RBP12.62□□□□□ -0.39
SPC25-203ENST00000472216 OLFML2BQ68BL8 750 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
SPC25-203ENST00000472216 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 MTUS1Q9ULD2 1270 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
SPC25-203ENST00000472216 MOXD2PA6NHM9 499 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
SPC25-203ENST00000472216 PFKMP08237 780 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 HMGCS2P54868 508 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 SHC2P98077 582 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 SPP2Q13103 211 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
SPC25-203ENST00000472216 CBX2Q14781 532 aaPredicted RBP12.61□□□□□ -0.39
SPC25-203ENST00000472216 ANGPT1Q15389 498 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 CLUL1Q15846 466 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 TIGD5Q53EQ6 642 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 C15orf52Q6ZUT6 534 aaKnown RBP12.61□□□□□ -0.39
SPC25-203ENST00000472216 TMEFF1Q8IYR6 380 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 MRPL38Q96DV4 380 aaKnown RBP12.61□□□□□ -0.39
SPC25-203ENST00000472216 GLT1D1Q96MS3 346 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 ELP1O95163 1332 aa12.61□□□□□ -0.39
SPC25-203ENST00000472216 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 ACTN1P12814 892 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 IGHMBP2P38935 993 aaKnown RBP12.6□□□□□ -0.39
SPC25-203ENST00000472216 CCNA1P78396 465 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 LMNB2Q03252 620 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 TCP10Q12799 353 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 CRIPAKQ8N1N5 446 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
SPC25-203ENST00000472216 BANK1Q8NDB2 785 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 GTF3C2Q8WUA4 911 aaPredicted RBP12.6□□□□□ -0.39
SPC25-203ENST00000472216 ZDHHC15Q96MV8 337 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
SPC25-203ENST00000472216 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
SPC25-203ENST00000472216 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
SPC25-203ENST00000472216 COL4A3Q01955 1670 aa12.59□□□□□ -0.39
SPC25-203ENST00000472216 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
SPC25-203ENST00000472216 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
SPC25-203ENST00000472216 ERVK-21P61565 698 aa12.59□□□□□ -0.39
SPC25-203ENST00000472216 PRAMEF19Q5SWL8 479 aa12.59□□□□□ -0.39
SPC25-203ENST00000472216 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
SPC25-203ENST00000472216 KDF1Q8NAX2 398 aaPredicted RBP12.59□□□□□ -0.39
SPC25-203ENST00000472216 VTI1AQ96AJ9 217 aa12.59□□□□□ -0.39
SPC25-203ENST00000472216 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
SPC25-203ENST00000472216 ANKRD17O75179 2603 aaKnown RBP12.59□□□□□ -0.39
SPC25-203ENST00000472216 ARVCFO00192 962 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 ICAM3P32942 547 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 LTBRP36941 435 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 GRB14Q14449 540 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 PTPN21Q16825 1174 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 TCEAL5Q5H9L2 206 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
SPC25-203ENST00000472216 CCDC84Q86UT8 332 aaPredicted RBP12.58□□□□□ -0.4
SPC25-203ENST00000472216 ZNF280CQ8ND82 737 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 UMODL1Q5DID0 1318 aa12.58□□□□□ -0.4
SPC25-203ENST00000472216 PMLP29590 882 aa12.57□□□□□ -0.4
SPC25-203ENST00000472216 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
SPC25-203ENST00000472216 CLCN5P51795 746 aa12.57□□□□□ -0.4
SPC25-203ENST00000472216 PIK3R5Q8WYR1 880 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms