RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 PPP2R5BQ15173 497 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 SPTY2D1Q68D10 685 aaPredicted RBP17.2■□□□□ 0.34
UBXN11-213ENST00000472155 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 PROM2Q8N271 834 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 MKNK2Q9HBH9 465 aa17.2■□□□□ 0.34
UBXN11-213ENST00000472155 CYTH3O43739 400 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
UBXN11-213ENST00000472155 CALM1P0DP23 149 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 CALM2P0DP24 149 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 CALM3P0DP25 149 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 PCP11498 1178 aaKnown RBP17.19■□□□□ 0.34
UBXN11-213ENST00000472155 TNNT1P13805 278 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 XBP1P17861 261 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 NLRP5P59047 1200 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 SMYD4Q8IYR2 804 aaPredicted RBP17.19■□□□□ 0.34
UBXN11-213ENST00000472155 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 KAT14Q9H8E8 782 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 IKBKBO14920 756 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 MCM7P33993 719 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 STX8Q9UNK0 236 aa17.19■□□□□ 0.34
UBXN11-213ENST00000472155 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
UBXN11-213ENST00000472155 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
UBXN11-213ENST00000472155 SARSP49591 514 aaKnown RBP17.18■□□□□ 0.34
UBXN11-213ENST00000472155 PFKFB3Q16875 520 aaPredicted RBP17.18■□□□□ 0.34
UBXN11-213ENST00000472155 ZNF592Q92610 1267 aa17.18■□□□□ 0.34
UBXN11-213ENST00000472155 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
UBXN11-213ENST00000472155 MAD2L2Q9UI95 211 aa17.18■□□□□ 0.34
UBXN11-213ENST00000472155 SLURP2P0DP57 97 aa17.18■□□□□ 0.34
UBXN11-213ENST00000472155 RASA1P20936 1047 aa17.18■□□□□ 0.34
UBXN11-213ENST00000472155 NAA30Q147X3 362 aaPredicted RBP17.18■□□□□ 0.34
UBXN11-213ENST00000472155 SERPINC1P01008 464 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 TSPY3P0CV98 308 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 TSPY8P0CW00 308 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 UBASH3AP57075 661 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
UBXN11-213ENST00000472155 TBC1D16Q8TBP0 767 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 CDK5RAP2Q96SN8 1893 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 QTRT2Q9H974 415 aaKnown RBP17.17■□□□□ 0.34
UBXN11-213ENST00000472155 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 CD44P16070 742 aaKnown RBP17.17■□□□□ 0.34
UBXN11-213ENST00000472155 MORC3Q14149 939 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 SAMSN1Q9NSI8 373 aaKnown RBP17.17■□□□□ 0.34
UBXN11-213ENST00000472155 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
UBXN11-213ENST00000472155 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 CFAP100Q494V2 611 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 CEP131Q9UPN4 1083 aa17.17■□□□□ 0.34
UBXN11-213ENST00000472155 POLRMTO00411 1230 aaKnown RBP17.16■□□□□ 0.34
UBXN11-213ENST00000472155 PPP4CP60510 307 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 NT5DC1Q5TFE4 455 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 E4F1Q66K89 784 aaPredicted RBP17.16■□□□□ 0.34
UBXN11-213ENST00000472155 BLZF1Q9H2G9 400 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 NFE2L3Q9Y4A8 694 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 STX17P56962 302 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 RHBDL3P58872 404 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 ST5P78524 1137 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 KLHL10Q6JEL2 608 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 CLEC10AQ8IUN9 316 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 TEX11Q8IYF3 940 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 PAGE5Q96GU1 130 aa17.16■□□□□ 0.34
UBXN11-213ENST00000472155 TRPC5Q9UL62 973 aaPredicted RBP17.16■□□□□ 0.34
UBXN11-213ENST00000472155 NAV1Q8NEY1 1877 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 BAG3O95817 575 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 MTRQ99707 1265 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 IL1R1P14778 569 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 GTF2F1P35269 517 aaKnown RBP eCLIP17.15■□□□□ 0.34
UBXN11-213ENST00000472155 CDK8P49336 464 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 GTF2IP78347 998 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 ATP2C1P98194 919 aaPredicted RBP17.15■□□□□ 0.34
UBXN11-213ENST00000472155 DPYDQ12882 1025 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
UBXN11-213ENST00000472155 ZNF444Q8N0Y2 327 aaPredicted RBP17.15■□□□□ 0.34
UBXN11-213ENST00000472155 CCAR2Q8N163 923 aaKnown RBP17.15■□□□□ 0.34
UBXN11-213ENST00000472155 SNED1Q8TER0 1413 aa17.14■□□□□ 0.34
UBXN11-213ENST00000472155 FLT1P17948 1338 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
UBXN11-213ENST00000472155 TPM4P67936 248 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 SPATA20Q8TB22 786 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
UBXN11-213ENST00000472155 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 DDX60LQ5H9U9 1706 aaKnown RBP17.14■□□□□ 0.33
UBXN11-213ENST00000472155 ADRA2BP18089 450 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 GRM4Q14833 912 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 HEATR3Q7Z4Q2 680 aa17.14■□□□□ 0.33
UBXN11-213ENST00000472155 ROBO3Q96MS0 1386 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 GPR75-ASB3A0A0A6YYF3 556 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 PICALMQ13492 652 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
UBXN11-213ENST00000472155 NYAP1Q6ZVC0 841 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
UBXN11-213ENST00000472155 BLIDQ8IZY5 108 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms