RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SNX14Q9Y5W7 946 aa14.52□□□□□ -0.09
PRKCB-205ENST00000472066 PCNTO95613 3336 aa14.52□□□□□ -0.09
PRKCB-205ENST00000472066 F5H6K3 240 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-205ENST00000472066 KLRC3Q07444 240 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 KRT32Q14532 448 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 DGKHQ86XP1 1220 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 MB21D2Q8IYB1 491 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-205ENST00000472066 LRRC47Q8N1G4 583 aaKnown RBP14.51□□□□□ -0.09
PRKCB-205ENST00000472066 ANKS1AQ92625 1134 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 LPAR1Q92633 364 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 NEK1Q96PY6 1258 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 GOPCQ9HD26 462 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 SAGE1Q9NXZ1 904 aa14.51□□□□□ -0.09
PRKCB-205ENST00000472066 PHIPQ8WWQ0 1821 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 ATAD5Q96QE3 1844 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 CA12O43570 354 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 RAD21O60216 631 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 TOP1P11387 765 aaKnown RBP14.5□□□□□ -0.09
PRKCB-205ENST00000472066 VCAM1P19320 739 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 OSBPP22059 807 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 MCCP23508 829 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 PABPC4Q13310 644 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRKCB-205ENST00000472066 COL9A3Q14050 684 aaPredicted RBP14.5□□□□□ -0.09
PRKCB-205ENST00000472066 ADCK5Q3MIX3 580 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 CHST3Q7LGC8 479 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 SPICE1Q8N0Z3 855 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 ENAHQ8N8S7 591 aaPredicted RBP14.5□□□□□ -0.09
PRKCB-205ENST00000472066 GMCL1P1Q8NEA9 526 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 TMEM47Q9BQJ4 181 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 UBAC1Q9BSL1 405 aa14.5□□□□□ -0.09
PRKCB-205ENST00000472066 TNKSO95271 1327 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L15C9J2P7 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L13C9JLJ4 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L11C9JVI0 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L18D6R9N7 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L22D6RA61 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L17D6RBQ6 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L19D6RCP7 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L20D6RJB6 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 IFIT3O14879 490 aaKnown RBP14.49□□□□□ -0.09
PRKCB-205ENST00000472066 TBC1D8O95759 1140 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 MCM5P33992 734 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 ANTXR2P58335 489 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 USP17L24Q0WX57 530 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 SEC23AQ15436 765 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 TAF1CQ15572 869 aaPredicted RBP14.49□□□□□ -0.09
PRKCB-205ENST00000472066 CATSPERGQ6ZRH7 1159 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 CFHR5Q9BXR6 569 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 RPAP3Q9H6T3 665 aaPredicted RBP14.49□□□□□ -0.09
PRKCB-205ENST00000472066 ZFYVE28Q9HCC9 887 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 LAMA4Q16363 1823 aa14.49□□□□□ -0.09
PRKCB-205ENST00000472066 GREB1LQ9C091 1923 aaPredicted RBP14.49□□□□□ -0.09
PRKCB-205ENST00000472066 WDR46O15213 610 aaKnown RBP14.48□□□□□ -0.09
PRKCB-205ENST00000472066 PRC1O43663 620 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 NDUFB10O96000 172 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 HMGB1P09429 215 aaKnown RBP14.48□□□□□ -0.09
PRKCB-205ENST00000472066 HSPA1AP0DMV8 641 aaKnown RBP14.48□□□□□ -0.09
PRKCB-205ENST00000472066 HSPA1BP0DMV9 641 aaKnown RBP14.48□□□□□ -0.09
PRKCB-205ENST00000472066 CYP2C8P10632 490 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 CRHR2Q13324 411 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 SLFN13Q68D06 897 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 JAKMIP1Q96N16 626 aaKnown RBP14.48□□□□□ -0.09
PRKCB-205ENST00000472066 ASCC2Q9H1I8 757 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-205ENST00000472066 R3HDMLQ9H3Y0 253 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 PNMA3Q9UL41 463 aa14.48□□□□□ -0.09
PRKCB-205ENST00000472066 ERICH2A1L162 156 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 FOXN1O15353 648 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 EXOSC10Q01780 885 aaKnown RBP14.47□□□□□ -0.09
PRKCB-205ENST00000472066 SART3Q15020 963 aaKnown RBP14.47□□□□□ -0.09
PRKCB-205ENST00000472066 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 FAM83BQ5T0W9 1011 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 IFIT1BQ5T764 474 aaKnown RBP14.47□□□□□ -0.09
PRKCB-205ENST00000472066 DHX32Q7L7V1 743 aaKnown RBP14.47□□□□□ -0.09
PRKCB-205ENST00000472066 GMCL1Q96IK5 515 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 PARK7Q99497 189 aaKnown RBP14.47□□□□□ -0.09
PRKCB-205ENST00000472066 NUP88Q99567 741 aaPredicted RBP14.47□□□□□ -0.09
PRKCB-205ENST00000472066 P2RX7Q99572 595 aaKnown RBP14.47□□□□□ -0.09
PRKCB-205ENST00000472066 MTA3Q9BTC8 594 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 KAT14Q9H8E8 782 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 TSKSQ9UJT2 592 aa14.47□□□□□ -0.09
PRKCB-205ENST00000472066 TLR2O60603 784 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 BMP3P12645 472 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 PSMA5P28066 241 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 IRX3P78415 501 aaPredicted RBP14.46□□□□□ -0.09
PRKCB-205ENST00000472066 WTAPQ15007 396 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 PNMA1Q8ND90 353 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 CHMP4CQ96CF2 233 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 TMEM87BQ96K49 555 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 TANGO6Q9C0B7 1094 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 SENP2Q9HC62 589 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 GPHNQ9NQX3 736 aaPredicted RBP14.46□□□□□ -0.09
PRKCB-205ENST00000472066 HOXC10Q9NYD6 342 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 MTMR7Q9Y216 660 aa14.46□□□□□ -0.09
PRKCB-205ENST00000472066 WDR19Q8NEZ3 1342 aa14.45□□□□□ -0.1
PRKCB-205ENST00000472066 MYH8P13535 1937 aa14.45□□□□□ -0.1
PRKCB-205ENST00000472066 SH2B2O14492 632 aaPredicted RBP14.45□□□□□ -0.1
PRKCB-205ENST00000472066 CPA1P15085 419 aa14.45□□□□□ -0.1
PRKCB-205ENST00000472066 SLC1A4P43007 532 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms