RNA–Protein interactions for RNA: ENST00000472040.1

GREB1-209, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 5

Gene GREB1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-209ENST00000472040 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 APOBRQ0VD83 1088 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 LPAR1Q92633 364 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 SLC10A4Q96EP9 437 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 ZNF408Q9H9D4 720 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
GREB1-209ENST00000472040 RBM28Q9NW13 759 aaKnown RBP17.14■□□□□ 0.33
GREB1-209ENST00000472040 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.33
GREB1-209ENST00000472040 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 UBE2Q2LH0YL09 131 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
GREB1-209ENST00000472040 KIF5BP33176 963 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 GNAQP50148 359 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 BACE1P56817 501 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 FMR1Q06787 632 aaKnown RBP eCLIP17.13■□□□□ 0.33
GREB1-209ENST00000472040 PPIL2Q13356 520 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 ME3Q16798 604 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 SH3D19Q5HYK7 790 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 FANCBQ8NB91 859 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 DCAF4Q8WV16 495 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 GMCL1Q96IK5 515 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 LZTS2Q9BRK4 669 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
GREB1-209ENST00000472040 VCPKMTQ9H867 229 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 SENP2Q9HC62 589 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 FZD1Q9UP38 647 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 ZHX2Q9Y6X8 837 aa17.13■□□□□ 0.33
GREB1-209ENST00000472040 TMEM88BA6NKF7 163 aa17.12■□□□□ 0.33
GREB1-209ENST00000472040 F5H6K3 240 aa17.12■□□□□ 0.33
GREB1-209ENST00000472040 KLRC3Q07444 240 aa17.12■□□□□ 0.33
GREB1-209ENST00000472040 CUL4AQ13619 759 aa17.12■□□□□ 0.33
GREB1-209ENST00000472040 SHROOM1Q2M3G4 852 aaPredicted RBP17.12■□□□□ 0.33
GREB1-209ENST00000472040 GPATCH4Q5T3I0 446 aaKnown RBP17.12■□□□□ 0.33
GREB1-209ENST00000472040 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
GREB1-209ENST00000472040 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
GREB1-209ENST00000472040 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
GREB1-209ENST00000472040 KCNH4Q9UQ05 1017 aa17.12■□□□□ 0.33
GREB1-209ENST00000472040 PLA2G6O60733 806 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 ZBTB48P10074 688 aaPredicted RBP17.11■□□□□ 0.33
GREB1-209ENST00000472040 PDHBP11177 359 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 METAP2P50579 478 aaKnown RBP eCLIP17.11■□□□□ 0.33
GREB1-209ENST00000472040 ATP2B2Q01814 1243 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 SPP2Q13103 211 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 GRM4Q14833 912 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 CPLX2Q6PUV4 134 aaKnown RBP17.11■□□□□ 0.33
GREB1-209ENST00000472040 MOB2Q70IA6 237 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
GREB1-209ENST00000472040 LLPHQ9BRT6 129 aaKnown RBP17.11■□□□□ 0.33
GREB1-209ENST00000472040 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 MYH4Q9Y623 1939 aa17.11■□□□□ 0.33
GREB1-209ENST00000472040 OTOFQ9HC10 1997 aa17.1■□□□□ 0.33
GREB1-209ENST00000472040 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
GREB1-209ENST00000472040 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
GREB1-209ENST00000472040 PARP1P09874 1014 aaKnown RBP17.1■□□□□ 0.33
GREB1-209ENST00000472040 ECE1P42892 770 aa17.1■□□□□ 0.33
GREB1-209ENST00000472040 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
GREB1-209ENST00000472040 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
GREB1-209ENST00000472040 ELP3Q9H9T3 547 aa17.1■□□□□ 0.33
GREB1-209ENST00000472040 PHIPQ8WWQ0 1821 aa17.1■□□□□ 0.33
GREB1-209ENST00000472040 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
GREB1-209ENST00000472040 CDKL5O76039 1030 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 HUNKP57058 714 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 RTN1Q16799 776 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 MICU3Q86XE3 530 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
GREB1-209ENST00000472040 OPTNQ96CV9 577 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 CLMNQ96JQ2 1002 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 FEZ1Q99689 392 aa17.09■□□□□ 0.33
GREB1-209ENST00000472040 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
GREB1-209ENST00000472040 A0A0G2JLL6 359 aaPredicted RBP17.08■□□□□ 0.32
GREB1-209ENST00000472040 NDUFB10O96000 172 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 SLC1A4P43007 532 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 ZNF543Q08ER8 600 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 SCRN1Q12765 414 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 RGMBQ6NW40 437 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 FASTKD5Q7L8L6 764 aaKnown RBP17.08■□□□□ 0.32
GREB1-209ENST00000472040 PRRT2Q7Z6L0 340 aaPredicted RBP17.08■□□□□ 0.32
GREB1-209ENST00000472040 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.32
GREB1-209ENST00000472040 NUP133Q8WUM0 1156 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 CCDC102AQ96A19 550 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 WNK4Q96J92 1243 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.32
GREB1-209ENST00000472040 TMOD4Q9NZQ9 345 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
GREB1-209ENST00000472040 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.32
GREB1-209ENST00000472040 IRF6O14896 467 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 BMP3P12645 472 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 IFNAR1P17181 557 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 APLP1P51693 650 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 GTF2A2P52657 109 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms