RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 TC2NQ8N9U0 490 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 EHD4Q9H223 541 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 RRAGCQ9HB90 399 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 CORO1CQ9ULV4 474 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 CNTNAP1P78357 1384 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 PSMA5P28066 241 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 NECTIN1Q15223 517 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 MIS18BP1Q6P0N0 1132 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 RBM12BQ8IXT5 1001 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 PI4K2BQ8TCG2 481 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 MMTAG2Q9BU76 263 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 FRMD3A2A2Y4 597 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 BIN1O00499 593 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 SMNDC1O75940 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 MAP4K4O95819 1239 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 PDHBP11177 359 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 CAPRIN2Q6IMN6 1127 aaKnown RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 C6orf89Q6UWU4 347 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 RUFY2Q8WXA3 655 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 MRPS27Q92552 414 aaKnown RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 MYO1AQ9UBC5 1043 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 ZKSCAN1P17029 563 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 LMOD1P29536 600 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 NCAPG2Q86XI2 1143 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 RIN2Q8WYP3 895 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 DPF2Q92785 391 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
CHMP2B-203ENST00000471660 GOLGA6BA6NDN3 693 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 F6X3S4 739 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 SNX1Q13596 522 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 KARSQ15046 597 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 NOA1Q8NC60 698 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 SDF4Q9BRK5 362 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 SBF1O95248 1867 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 CCDC85CA6NKD9 419 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 MGRN1O60291 552 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 DTNBO60941 627 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 PPFIA3O75145 1194 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 CDKL5O76039 1030 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 SERPINC1P01008 464 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 HSPA8P11142 646 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 MYL5Q02045 173 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 NAA35Q5VZE5 725 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 CWF19L1Q69YN2 538 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 CRELD2Q6UXH1 353 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 BZW1Q7L1Q6 419 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 NAPGQ99747 312 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 NAA15Q9BXJ9 866 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 EPN3Q9H201 632 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.48
CHMP2B-203ENST00000471660 OPA1O60313 960 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 PEX19P40855 299 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 MPRIPQ6WCQ1 1025 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 BRF1Q92994 677 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 GPATCH3Q96I76 525 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 PANX2Q96RD6 677 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 ADGRG1Q9Y653 693 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 THSD7BQ9C0I4 1608 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 AMPD2Q01433 879 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 XRCC4Q13426 336 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 ADALQ6DHV7 355 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 SLC30A9Q6PML9 568 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 UBE3BQ7Z3V4 1068 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 RUBCNQ92622 972 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms