RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 TROAPQ12815 778 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 TRIM29Q14134 588 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 PKN1Q16512 942 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 RESP18Q5W5W9 173 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 SHC4Q6S5L8 630 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 NOSTRINQ8IVI9 506 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 JMYQ8N9B5 988 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 PTCD2Q8WV60 388 aaKnown RBP7.41□□□□□ -1.22
SPEN-204ENST00000471538 TIGD1Q96MW7 591 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 ZNF830Q96NB3 372 aaPredicted RBP7.41□□□□□ -1.22
SPEN-204ENST00000471538 BPIFA3Q9BQP9 254 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 UBAC1Q9BSL1 405 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 FOXP1Q9H334 677 aaPredicted RBP7.41□□□□□ -1.22
SPEN-204ENST00000471538 TTC12Q9H892 705 aaPredicted RBP7.41□□□□□ -1.22
SPEN-204ENST00000471538 TOMM22Q9NS69 142 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 ATP8A2Q9NTI2 1148 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 SPTLC3Q9NUV7 552 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 ANO10Q9NW15 660 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 KIAA1468Q9P260 1216 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 ARPP21Q9UBL0 812 aaPredicted RBP7.41□□□□□ -1.22
SPEN-204ENST00000471538 NRXN2Q9P2S2 1712 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 XDHP47989 1333 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 A0A087WWV3 80 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.4□□□□□ -1.22
SPEN-204ENST00000471538 BTBD18B2RXH4 712 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 CUTAO60888 179 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 DDAH1O94760 285 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 TOMM70O94826 608 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 ZNF202O95125 648 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 CYP2D6P10635 497 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 NT5C2P49902 561 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 CHAF1AQ13111 956 aaPredicted RBP7.4□□□□□ -1.22
SPEN-204ENST00000471538 DIS3L2Q8IYB7 885 aaKnown RBP7.4□□□□□ -1.22
SPEN-204ENST00000471538 ELOA2Q8IYF1 753 aaPredicted RBP7.4□□□□□ -1.22
SPEN-204ENST00000471538 TRIM22Q8IYM9 498 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 STK11IPQ8N1F8 1099 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 CMTR1Q8N1G2 835 aaKnown RBP7.4□□□□□ -1.22
SPEN-204ENST00000471538 CNBD1Q8NA66 436 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 KLRG1Q96E93 195 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 CRNKL1Q9BZJ0 848 aaKnown RBP7.4□□□□□ -1.22
SPEN-204ENST00000471538 RBM28Q9NW13 759 aaKnown RBP7.4□□□□□ -1.22
SPEN-204ENST00000471538 AATFQ9NY61 560 aaKnown RBP eCLIP7.4□□□□□ -1.22
SPEN-204ENST00000471538 TUBE1Q9UJT0 475 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 KCNJ14Q9UNX9 436 aa7.4□□□□□ -1.22
SPEN-204ENST00000471538 CNTNAP5Q8WYK1 1306 aa7.4□□□□□ -1.23
SPEN-204ENST00000471538 BRCA1P38398 1863 aaKnown RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 ANKRD31Q8N7Z5 1873 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 KLRG2A4D1S0 409 aaPredicted RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 PRPF3O43395 683 aaKnown RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 PLEKHA8P1O95397 391 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 CALM1P0DP23 149 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 CALM2P0DP24 149 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 CALM3P0DP25 149 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 MARCKSP29966 332 aaPredicted RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 PRELPP51888 382 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 PPP4CP60510 307 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 GPSM2P81274 684 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 NPY5RQ15761 445 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 GRIK5Q16478 980 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 IFIT1BQ5T764 474 aaKnown RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 SPTY2D1Q68D10 685 aaPredicted RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 TMTC3Q6ZXV5 915 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 IQCA1Q86XH1 822 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 MPNDQ8N594 471 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 WDR66Q8TBY9 1149 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 KIAA1524Q8TCG1 905 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 NUP133Q8WUM0 1156 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 ERCC4Q92889 916 aaPredicted RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 TNFRSF25Q93038 417 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 MRFAP1L1Q96HT8 127 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 NAP1L5Q96NT1 182 aaPredicted RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 PHF20Q9BVI0 1012 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 FBXO2Q9UK22 296 aaPredicted RBP7.39□□□□□ -1.23
SPEN-204ENST00000471538 PYCARDQ9ULZ3 195 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 FOCADQ5VW36 1801 aa7.39□□□□□ -1.23
SPEN-204ENST00000471538 GOLGA6L6A8MZA4 724 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 PRDM1O75626 825 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 IL1R1P14778 569 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 PTPREP23469 700 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 HOXA10P31260 410 aaPredicted RBP7.38□□□□□ -1.23
SPEN-204ENST00000471538 SYKP43405 635 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 NLRP12P59046 1061 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 PLCB2Q00722 1185 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 DDR1Q08345 913 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 NR5A1Q13285 461 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 NOLC1Q14978 699 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPEN-204ENST00000471538 NCAPHQ15003 741 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 SAFBQ15424 915 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPEN-204ENST00000471538 DPCR1Q3MIW9 517 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 RILPL1Q5EBL4 403 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 C12orf60Q5U649 245 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 RCSD1Q6JBY9 416 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 CATIPQ7Z7H3 387 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 DZIP1Q86YF9 867 aaKnown RBP7.38□□□□□ -1.23
SPEN-204ENST00000471538 PLPP6Q8IY26 295 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 CEP57L1Q8IYX8 460 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 NLGN1Q8N2Q7 840 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 KRI1Q8N9T8 703 aaKnown RBP7.38□□□□□ -1.23
SPEN-204ENST00000471538 SPC24Q8NBT2 197 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 OXER1Q8TDS5 423 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms