RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 XPCQ01831 940 aaPredicted RBP3.72□□□□□ -1.81
COMMD3-209ENST00000471350 EGR3Q06889 387 aa3.72□□□□□ -1.81
COMMD3-209ENST00000471350 MAP3K11Q16584 847 aa3.72□□□□□ -1.81
COMMD3-209ENST00000471350 BNC2Q6ZN30 1099 aaPredicted RBP3.72□□□□□ -1.81
COMMD3-209ENST00000471350 PDZD8Q8NEN9 1154 aa3.72□□□□□ -1.81
COMMD3-209ENST00000471350 CYB5D2Q8WUJ1 264 aa3.72□□□□□ -1.81
COMMD3-209ENST00000471350 LINC01599Q8WXQ3 324 aa3.72□□□□□ -1.81
COMMD3-209ENST00000471350 SLC26A8Q96RN1 970 aa3.72□□□□□ -1.81
COMMD3-209ENST00000471350 TRIT1Q9H3H1 467 aaKnown RBP3.72□□□□□ -1.81
COMMD3-209ENST00000471350 POLR3KQ9Y2Y1 108 aaPredicted RBP3.72□□□□□ -1.81
COMMD3-209ENST00000471350 PCDHA11Q9Y5I1 949 aa3.72□□□□□ -1.81
COMMD3-209ENST00000471350 B8ZZF3 427 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 TMEM253P0C7T8 217 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 CEBPAP49715 358 aaPredicted RBP3.71□□□□□ -1.82
COMMD3-209ENST00000471350 DLG4P78352 724 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 PSMD2Q13200 908 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 IRF2BP1Q8IU81 584 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 SLFN12Q8IYM2 578 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 RNF141Q8WVD5 230 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 RHOVQ96L33 236 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 DUSP9Q99956 384 aaKnown RBP3.71□□□□□ -1.82
COMMD3-209ENST00000471350 BCL11AQ9H165 835 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 DUSP13Q9UII6 198 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 KCNH3Q9ULD8 1083 aa3.71□□□□□ -1.82
COMMD3-209ENST00000471350 YBX2Q9Y2T7 364 aaKnown RBP3.71□□□□□ -1.82
COMMD3-209ENST00000471350 A0A0G2JLL6 359 aaPredicted RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 ANKRD33BA6NCL7 494 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 TCAF2A6NFQ2 919 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 PEX10O60683 326 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 ST13P50502 369 aaKnown RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 GALK1P51570 392 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 YARSP54577 528 aaKnown RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 TAF1CQ15572 869 aaPredicted RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 CCDC84Q86UT8 332 aaPredicted RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 LILRA2Q8N149 483 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 BAHD1Q8TBE0 780 aaPredicted RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 JARID2Q92833 1246 aaPredicted RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 KCNN1Q92952 543 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 INTS4Q96HW7 963 aaKnown RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 KCNC2Q96PR1 638 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 NOC4LQ9BVI4 516 aaKnown RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 ZNF552Q9H707 407 aaPredicted RBP3.7□□□□□ -1.82
COMMD3-209ENST00000471350 GPATCH2Q9NW75 528 aa3.7□□□□□ -1.82
COMMD3-209ENST00000471350 USP31Q70CQ4 1352 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 FITM1A5D6W6 292 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 CHURC1-FNTBB4DL54 471 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 PSPNO60542 156 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 F13A1P00488 732 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 GARTP22102 1010 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 DAB2P98082 770 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 PWP1Q13610 501 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 SSPNQ14714 243 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 SND1Q7KZF4 910 aaKnown RBP eCLIP3.69□□□□□ -1.82
COMMD3-209ENST00000471350 NLRX1Q86UT6 975 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 SGPP1Q9BX95 441 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 EPB41L4AQ9HCS5 686 aaPredicted RBP3.69□□□□□ -1.82
COMMD3-209ENST00000471350 MRS2Q9HD23 443 aa3.69□□□□□ -1.82
COMMD3-209ENST00000471350 TEX51A0A1B0GUA7 166 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 F6X3S4 739 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 NUAK1O60285 661 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 TRIM13O60858 407 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 SEMA7AO75326 666 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 PDIA4P13667 645 aaKnown RBP3.68□□□□□ -1.82
COMMD3-209ENST00000471350 PLCG1P19174 1290 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 TNNI2P48788 182 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 LMNB2Q03252 620 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 MLECQ14165 292 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 CIAPIN1Q6FI81 312 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 ZNF605Q86T29 641 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 RELL1Q8IUW5 271 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 AEBP1Q8IUX7 1158 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 USHBP1Q8N6Y0 703 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 FAM13CQ8NE31 585 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 GATAD2BQ8WXI9 593 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 DHX38Q92620 1227 aaKnown RBP3.68□□□□□ -1.82
COMMD3-209ENST00000471350 KREMEN1Q96MU8 473 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 HDAC8Q9BY41 377 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 IRF2BPLQ9H1B7 796 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 SLC6A17Q9H1V8 727 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 CWC22Q9HCG8 908 aaKnown RBP3.68□□□□□ -1.82
COMMD3-209ENST00000471350 REV1Q9UBZ9 1251 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 PARP2Q9UGN5 583 aa3.68□□□□□ -1.82
COMMD3-209ENST00000471350 TMEM82A0PJX8 343 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 SORBS3O60504 671 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 UBOX5O94941 541 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 LTKP29376 864 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 CTSWP56202 376 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 CAMK2GQ13555 558 aaPredicted RBP3.67□□□□□ -1.82
COMMD3-209ENST00000471350 DNAJC14Q6Y2X3 702 aaPredicted RBP3.67□□□□□ -1.82
COMMD3-209ENST00000471350 OXR1Q8N573 874 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 PANK1Q8TE04 598 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 ASCC2Q9H1I8 757 aaPredicted RBP3.67□□□□□ -1.82
COMMD3-209ENST00000471350 PARD6AQ9NPB6 346 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 MBD1Q9UIS9 605 aaPredicted RBP3.67□□□□□ -1.82
COMMD3-209ENST00000471350 JAG2Q9Y219 1238 aa3.67□□□□□ -1.82
COMMD3-209ENST00000471350 HTR3BO95264 441 aa3.66□□□□□ -1.82
COMMD3-209ENST00000471350 PF4P02776 101 aa3.66□□□□□ -1.82
COMMD3-209ENST00000471350 ERCC3P19447 782 aa3.66□□□□□ -1.82
COMMD3-209ENST00000471350 SNX17Q15036 470 aa3.66□□□□□ -1.82
COMMD3-209ENST00000471350 CLEC16AQ2KHT3 1053 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms