RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 SNX17Q15036 470 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
MRPL40-203ENST00000471259 CCDC174Q6PII3 467 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 ADGRA1Q86SQ6 560 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 RNF180Q86T96 592 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 BADQ92934 168 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 TANGO6Q9C0B7 1094 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 SPATC1LQ9H0A9 340 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 PRDM6Q9NQX0 595 aa13.74□□□□□ -0.21
MRPL40-203ENST00000471259 RARBP10826 455 aa13.73□□□□□ -0.21
MRPL40-203ENST00000471259 FCER1AP12319 257 aa13.73□□□□□ -0.21
MRPL40-203ENST00000471259 DYNLL1P63167 89 aaKnown RBP13.73□□□□□ -0.21
MRPL40-203ENST00000471259 MAGEB6Q8N7X4 407 aa13.73□□□□□ -0.21
MRPL40-203ENST00000471259 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
MRPL40-203ENST00000471259 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
MRPL40-203ENST00000471259 MOV10L1Q9BXT6 1211 aaKnown RBP13.73□□□□□ -0.21
MRPL40-203ENST00000471259 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
MRPL40-203ENST00000471259 PDLIM7Q9NR12 457 aa13.73□□□□□ -0.21
MRPL40-203ENST00000471259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
MRPL40-203ENST00000471259 ZNF236Q9UL36 1845 aa13.73□□□□□ -0.21
MRPL40-203ENST00000471259 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
MRPL40-203ENST00000471259 CLTBP09497 229 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 ERCC3P19447 782 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 COPB2P35606 906 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 ADCYAP1R1P41586 468 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 PLS1Q14651 629 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 LRRC41Q15345 812 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 SHROOM1Q2M3G4 852 aaPredicted RBP13.72□□□□□ -0.21
MRPL40-203ENST00000471259 TRIM60Q495X7 471 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 POTEEQ6S8J3 1075 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 TMEM179Q6ZVK1 233 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 NCAPG2Q86XI2 1143 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 ERC1Q8IUD2 1116 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 AMOTL1Q8IY63 956 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 SSH3Q8TE77 659 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 RNPC3Q96LT9 517 aaKnown RBP13.72□□□□□ -0.21
MRPL40-203ENST00000471259 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
MRPL40-203ENST00000471259 PIH1D3Q9NQM4 214 aaKnown RBP13.72□□□□□ -0.21
MRPL40-203ENST00000471259 SWAP70Q9UH65 585 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 RLFQ13129 1914 aa13.72□□□□□ -0.21
MRPL40-203ENST00000471259 LTBP2Q14767 1821 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-203ENST00000471259 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-203ENST00000471259 IGHA2P01877 340 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 TRIM27P14373 513 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 RAG1P15918 1043 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
MRPL40-203ENST00000471259 TRPV1Q8NER1 839 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 NUP133Q8WUM0 1156 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 MYLIPQ8WY64 445 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 XPNPEP3Q9NQH7 507 aa13.71□□□□□ -0.21
MRPL40-203ENST00000471259 DIS3Q9Y2L1 958 aaKnown RBP13.71□□□□□ -0.21
MRPL40-203ENST00000471259 UNC80Q8N2C7 3258 aa13.71□□□□□ -0.22
MRPL40-203ENST00000471259 MAGEB6P1A0A0J9YX57 407 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 DCDC2CA8MYV0 355 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 FLOT1O75955 427 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 SHMT1P34896 483 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 SEPT2Q15019 361 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 TJAP1Q5JTD0 557 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 C9orf50Q5SZB4 431 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 ZKSCAN2Q63HK3 967 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 MAML3Q96JK9 1138 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
MRPL40-203ENST00000471259 DBNLQ9UJU6 430 aaKnown RBP13.7□□□□□ -0.22
MRPL40-203ENST00000471259 PHF24Q9UPV7 400 aa13.7□□□□□ -0.22
MRPL40-203ENST00000471259 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
MRPL40-203ENST00000471259 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 AKR1A1P14550 325 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 TLE2Q04725 743 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 FPGSQ05932 587 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 KCTD2Q14681 263 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 ANO1Q5XXA6 986 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 FERMT2Q96AC1 680 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 TOX2Q96NM4 488 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 GAS2L1Q99501 681 aaPredicted RBP13.69□□□□□ -0.22
MRPL40-203ENST00000471259 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
MRPL40-203ENST00000471259 KIAA0355O15063 1070 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
MRPL40-203ENST00000471259 COBLO75128 1261 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 PLCD1P51178 756 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 GABPAQ06546 454 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 FTSJ3Q8IY81 847 aaKnown RBP13.68□□□□□ -0.22
MRPL40-203ENST00000471259 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
MRPL40-203ENST00000471259 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 MMP19Q99542 508 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 CCDC8Q9H0W5 538 aaPredicted RBP13.68□□□□□ -0.22
MRPL40-203ENST00000471259 TTYH1Q9H313 450 aaPredicted RBP13.68□□□□□ -0.22
MRPL40-203ENST00000471259 TMEM39AQ9NV64 488 aa13.68□□□□□ -0.22
MRPL40-203ENST00000471259 TRIM43BA6NCK2 446 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 TRIM43Q96BQ3 446 aaPredicted RBP13.67□□□□□ -0.22
MRPL40-203ENST00000471259 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms