RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 NBPF11Q86T75 865 aa17.59■□□□□ 0.41
COL4A5-203ENST00000470339 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
COL4A5-203ENST00000470339 PRPF3O43395 683 aaKnown RBP17.58■□□□□ 0.4
COL4A5-203ENST00000470339 CTNND1O60716 968 aaKnown RBP17.58■□□□□ 0.4
COL4A5-203ENST00000470339 ASNSP08243 561 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 SNHG28P0DPA3 235 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 EEF2P13639 858 aaKnown RBP17.58■□□□□ 0.4
COL4A5-203ENST00000470339 ICA1Q05084 483 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.4
COL4A5-203ENST00000470339 PNMA8AQ86V59 439 aaPredicted RBP17.58■□□□□ 0.4
COL4A5-203ENST00000470339 SIAH1Q8IUQ4 282 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
COL4A5-203ENST00000470339 ZNF341Q9BYN7 854 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.4
COL4A5-203ENST00000470339 MAD2L2Q9UI95 211 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 ZBTB21Q9ULJ3 1066 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 MTMR6Q9Y217 621 aa17.58■□□□□ 0.4
COL4A5-203ENST00000470339 GDF11O95390 407 aa17.57■□□□□ 0.4
COL4A5-203ENST00000470339 DEXIO95424 95 aa17.57■□□□□ 0.4
COL4A5-203ENST00000470339 PARP1P09874 1014 aaKnown RBP17.57■□□□□ 0.4
COL4A5-203ENST00000470339 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
COL4A5-203ENST00000470339 SULF1Q8IWU6 871 aa17.57■□□□□ 0.4
COL4A5-203ENST00000470339 PHKBQ93100 1093 aa17.57■□□□□ 0.4
COL4A5-203ENST00000470339 SLC26A6Q9BXS9 759 aa17.57■□□□□ 0.4
COL4A5-203ENST00000470339 DOCK1Q14185 1865 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 POTECB2RU33 542 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 H3BQV1 296 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 PDHBP11177 359 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 JAG1P78504 1218 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
COL4A5-203ENST00000470339 IFFO2Q5TF58 517 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 SRBD1Q8N5C6 995 aaKnown RBP17.56■□□□□ 0.4
COL4A5-203ENST00000470339 GMCL1P1Q8NEA9 526 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 ARHGEF10LQ9HCE6 1279 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 SCAF8Q9UPN6 1271 aaKnown RBP17.56■□□□□ 0.4
COL4A5-203ENST00000470339 ATP6V1DQ9Y5K8 247 aa17.56■□□□□ 0.4
COL4A5-203ENST00000470339 BAZ2BQ9UIF8 2168 aaKnown RBP17.55■□□□□ 0.4
COL4A5-203ENST00000470339 PLEKHA8P1O95397 391 aa17.55■□□□□ 0.4
COL4A5-203ENST00000470339 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
COL4A5-203ENST00000470339 LRRC47Q8N1G4 583 aaKnown RBP17.55■□□□□ 0.4
COL4A5-203ENST00000470339 FBXO18Q8NFZ0 1043 aa17.55■□□□□ 0.4
COL4A5-203ENST00000470339 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
COL4A5-203ENST00000470339 C8orf76Q96K31 380 aa17.55■□□□□ 0.4
COL4A5-203ENST00000470339 GBP4Q96PP9 640 aa17.55■□□□□ 0.4
COL4A5-203ENST00000470339 SPZ1Q9BXG8 430 aa17.55■□□□□ 0.4
COL4A5-203ENST00000470339 SH2D4AQ9H788 454 aa17.55■□□□□ 0.4
COL4A5-203ENST00000470339 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
COL4A5-203ENST00000470339 USP17L5A8MUK1 530 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 KLRF2D3W0D1 207 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 DTNBO60941 627 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 F13A1P00488 732 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
COL4A5-203ENST00000470339 CLEC10AQ8IUN9 316 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 FAM177A1Q8N128 213 aaPredicted RBP17.54■□□□□ 0.4
COL4A5-203ENST00000470339 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 GMCL1Q96IK5 515 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
COL4A5-203ENST00000470339 TMX2Q9Y320 296 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 TCHHQ07283 1943 aa17.54■□□□□ 0.4
COL4A5-203ENST00000470339 YY1P25490 414 aa17.53■□□□□ 0.4
COL4A5-203ENST00000470339 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
COL4A5-203ENST00000470339 USP17L2Q6R6M4 530 aa17.53■□□□□ 0.4
COL4A5-203ENST00000470339 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
COL4A5-203ENST00000470339 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
COL4A5-203ENST00000470339 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
COL4A5-203ENST00000470339 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
COL4A5-203ENST00000470339 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
COL4A5-203ENST00000470339 F5H6K3 240 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 XBP1P17861 261 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 KLRC3Q07444 240 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 TRIM29Q14134 588 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 SLFN13Q68D06 897 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 CDC37L1Q7L3B6 337 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 KLRG1Q96E93 195 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 RIOX1Q9H6W3 641 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 GOPCQ9HD26 462 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 MYH15Q9Y2K3 1946 aa17.52■□□□□ 0.4
COL4A5-203ENST00000470339 A0A1W2PRG0 241 aa17.51■□□□□ 0.39
COL4A5-203ENST00000470339 SSC5DA1L4H1 1573 aa17.51■□□□□ 0.39
COL4A5-203ENST00000470339 PPFIA3O75145 1194 aa17.51■□□□□ 0.39
COL4A5-203ENST00000470339 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
COL4A5-203ENST00000470339 PKN1Q16512 942 aa17.51■□□□□ 0.39
COL4A5-203ENST00000470339 PFKFB3Q16875 520 aaPredicted RBP17.51■□□□□ 0.39
COL4A5-203ENST00000470339 NOL9Q5SY16 702 aaKnown RBP17.51■□□□□ 0.39
COL4A5-203ENST00000470339 SCYL3Q8IZE3 742 aa17.51■□□□□ 0.39
COL4A5-203ENST00000470339 PHIPQ8WWQ0 1821 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 PPP1R12BO60237 982 aaPredicted RBP17.5■□□□□ 0.39
COL4A5-203ENST00000470339 BAG4O95429 457 aaKnown RBP17.5■□□□□ 0.39
COL4A5-203ENST00000470339 SCG2P13521 617 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 NF2P35240 595 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 SLC1A4P43007 532 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 PRAMEF18Q5VWM3 479 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 WDR18Q9BV38 432 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 SH3GLB2Q9NR46 395 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 MTMR7Q9Y216 660 aa17.5■□□□□ 0.39
COL4A5-203ENST00000470339 PAPPA2Q9BXP8 1791 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms