RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
CALCA-204ENST00000469608 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
CALCA-204ENST00000469608 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
CALCA-204ENST00000469608 HTATIP2Q9BUP3 242 aa17.01■□□□□ 0.31
CALCA-204ENST00000469608 HMX1Q9NP08 348 aaPredicted RBP17.01■□□□□ 0.31
CALCA-204ENST00000469608 ALPK3Q96L96 1907 aa17.01■□□□□ 0.31
CALCA-204ENST00000469608 GREB1LQ9C091 1923 aaPredicted RBP17.01■□□□□ 0.31
CALCA-204ENST00000469608 COL11A1P12107 1806 aaPredicted RBP17■□□□□ 0.31
CALCA-204ENST00000469608 TTC41PQ6P2S7 1318 aa17■□□□□ 0.31
CALCA-204ENST00000469608 M0R2C6 588 aa17■□□□□ 0.31
CALCA-204ENST00000469608 ERC2O15083 957 aa17■□□□□ 0.31
CALCA-204ENST00000469608 GPAA1O43292 621 aa17■□□□□ 0.31
CALCA-204ENST00000469608 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
CALCA-204ENST00000469608 CCL14Q16627 93 aa17■□□□□ 0.31
CALCA-204ENST00000469608 MORN1Q5T089 497 aa17■□□□□ 0.31
CALCA-204ENST00000469608 LBX2Q6XYB7 198 aa17■□□□□ 0.31
CALCA-204ENST00000469608 APBA2Q99767 749 aa17■□□□□ 0.31
CALCA-204ENST00000469608 SH2D4AQ9H788 454 aa17■□□□□ 0.31
CALCA-204ENST00000469608 RPTORQ8N122 1335 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 FRMPD3Q5JV73 1810 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
CALCA-204ENST00000469608 XRCC5P13010 732 aaKnown RBP16.99■□□□□ 0.31
CALCA-204ENST00000469608 MX1P20591 662 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 TDO2P48775 406 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 PI4K2BQ8TCG2 481 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 DIS3LQ8TF46 1054 aaKnown RBP16.99■□□□□ 0.31
CALCA-204ENST00000469608 LPAR1Q92633 364 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 USP6NLQ92738 828 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 CRISPLD2Q9H0B8 497 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 EPB41L4AQ9HCS5 686 aaPredicted RBP16.99■□□□□ 0.31
CALCA-204ENST00000469608 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
CALCA-204ENST00000469608 TMX2Q9Y320 296 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 MYH4Q9Y623 1939 aa16.99■□□□□ 0.31
CALCA-204ENST00000469608 RAD21O60216 631 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 FLOT1O75955 427 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 APPP05067 770 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 EEF2P13639 858 aaKnown RBP16.98■□□□□ 0.31
CALCA-204ENST00000469608 MAP2K5Q13163 448 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 COG2Q14746 738 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 LRRFIP1Q32MZ4 808 aaKnown RBP16.98■□□□□ 0.31
CALCA-204ENST00000469608 TRMT44Q8IYL2 757 aaKnown RBP16.98■□□□□ 0.31
CALCA-204ENST00000469608 VCPKMTQ9H867 229 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 IVNS1ABPQ9Y6Y0 642 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 ZNF236Q9UL36 1845 aa16.98■□□□□ 0.31
CALCA-204ENST00000469608 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
CALCA-204ENST00000469608 HABP4Q5JVS0 413 aaKnown RBP16.97■□□□□ 0.31
CALCA-204ENST00000469608 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
CALCA-204ENST00000469608 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
CALCA-204ENST00000469608 PAWRQ96IZ0 340 aaKnown RBP16.97■□□□□ 0.31
CALCA-204ENST00000469608 KANSL2Q9H9L4 492 aa16.97■□□□□ 0.31
CALCA-204ENST00000469608 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
CALCA-204ENST00000469608 HOXC10Q9NYD6 342 aa16.97■□□□□ 0.31
CALCA-204ENST00000469608 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
CALCA-204ENST00000469608 SLC15A5A6NIM6 579 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 WDR46O15213 610 aaKnown RBP16.96■□□□□ 0.31
CALCA-204ENST00000469608 GNAT2P19087 354 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 RASA1P20936 1047 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 PTPREP23469 700 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 CACNB2Q08289 660 aaPredicted RBP16.96■□□□□ 0.31
CALCA-204ENST00000469608 PLS1Q14651 629 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 GIMAP6Q6P9H5 292 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 ATG4CQ96DT6 458 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
CALCA-204ENST00000469608 MOV10L1Q9BXT6 1211 aaKnown RBP16.96■□□□□ 0.31
CALCA-204ENST00000469608 SPATC1LQ9H0A9 340 aa16.96■□□□□ 0.31
CALCA-204ENST00000469608 COLQQ9Y215 455 aaPredicted RBP16.96■□□□□ 0.31
CALCA-204ENST00000469608 CCND3P30281 292 aaPredicted RBP16.95■□□□□ 0.3
CALCA-204ENST00000469608 DSG3P32926 999 aa16.95■□□□□ 0.3
CALCA-204ENST00000469608 GRB14Q14449 540 aa16.95■□□□□ 0.3
CALCA-204ENST00000469608 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.95■□□□□ 0.3
CALCA-204ENST00000469608 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
CALCA-204ENST00000469608 FLRT1Q9NZU1 646 aa16.95■□□□□ 0.3
CALCA-204ENST00000469608 RANBP2P49792 3224 aaKnown RBP16.95■□□□□ 0.3
CALCA-204ENST00000469608 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
CALCA-204ENST00000469608 PRDM1O75626 825 aa16.94■□□□□ 0.3
CALCA-204ENST00000469608 CAPN2P17655 700 aa16.94■□□□□ 0.3
CALCA-204ENST00000469608 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
CALCA-204ENST00000469608 NECAB2Q7Z6G3 386 aa16.94■□□□□ 0.3
CALCA-204ENST00000469608 MB21D1Q8N884 522 aa16.94■□□□□ 0.3
CALCA-204ENST00000469608 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
CALCA-204ENST00000469608 NR2E3Q9Y5X4 410 aa16.94■□□□□ 0.3
CALCA-204ENST00000469608 ZNFX1Q9P2E3 1918 aaKnown RBP16.94■□□□□ 0.3
CALCA-204ENST00000469608 EVI5O60447 810 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 ERCC3P19447 782 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 ADORA2AP29274 412 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
CALCA-204ENST00000469608 ZMYM1Q5SVZ6 1142 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 FAM83BQ5T0W9 1011 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 MFSD14CQ5VZR4 134 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 NCAPG2Q86XI2 1143 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 IFNL3Q8IZI9 196 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 ANKLE1Q8NAG6 615 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 NPLOC4Q8TAT6 608 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
CALCA-204ENST00000469608 PATL2C9JE40 543 aaKnown RBP16.92■□□□□ 0.3
CALCA-204ENST00000469608 CCDC129Q6ZRS4 1044 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms