RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 CASTP20810 708 aaKnown RBP26.94■■□□□ 1.9
SREBF1-208ENST00000469356 HMGCS2P54868 508 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 FGD1P98174 961 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 TMEM67Q5HYA8 995 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 CLEC10AQ8IUN9 316 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 ANKS1AQ92625 1134 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 MS4A4AQ96JQ5 239 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 C12orf42Q96LP6 360 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 VCPKMTQ9H867 229 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 KAT14Q9H8E8 782 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 CYP46A1Q9Y6A2 500 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 PTPRFP10586 1907 aa26.94■■□□□ 1.9
SREBF1-208ENST00000469356 ZYXQ15942 572 aaKnown RBP26.93■■□□□ 1.9
SREBF1-208ENST00000469356 SIAH1Q8IUQ4 282 aa26.93■■□□□ 1.9
SREBF1-208ENST00000469356 A0A1W2PRG0 241 aa26.92■■□□□ 1.9
SREBF1-208ENST00000469356 RAD21O60216 631 aa26.92■■□□□ 1.9
SREBF1-208ENST00000469356 AOC2O75106 756 aa26.92■■□□□ 1.9
SREBF1-208ENST00000469356 TM4SF4P48230 202 aa26.92■■□□□ 1.9
SREBF1-208ENST00000469356 ENAHQ8N8S7 591 aaPredicted RBP26.92■■□□□ 1.9
SREBF1-208ENST00000469356 TMEM47Q9BQJ4 181 aa26.92■■□□□ 1.9
SREBF1-208ENST00000469356 ZCCHC17Q9NP64 241 aaKnown RBP26.92■■□□□ 1.9
SREBF1-208ENST00000469356 ALDH1A1P00352 501 aa26.91■■□□□ 1.9
SREBF1-208ENST00000469356 RBM25P49756 843 aaKnown RBP26.91■■□□□ 1.9
SREBF1-208ENST00000469356 RUFY3Q7L099 469 aa26.91■■□□□ 1.9
SREBF1-208ENST00000469356 CHST3Q7LGC8 479 aa26.91■■□□□ 1.9
SREBF1-208ENST00000469356 GMCL1P1Q8NEA9 526 aa26.91■■□□□ 1.9
SREBF1-208ENST00000469356 IL27Q8NEV9 243 aa26.91■■□□□ 1.9
SREBF1-208ENST00000469356 IL17RAQ96F46 866 aa26.91■■□□□ 1.9
SREBF1-208ENST00000469356 ZSWIM6Q9HCJ5 1215 aa26.91■■□□□ 1.9
SREBF1-208ENST00000469356 F5H6K3 240 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 RPS6KB1P23443 525 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 LIFRP42702 1097 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 ANTXR2P58335 489 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 EXOSC10Q01780 885 aaKnown RBP26.9■■□□□ 1.9
SREBF1-208ENST00000469356 KLRC3Q07444 240 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 ANKRD23Q86SG2 305 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 LRRC47Q8N1G4 583 aaKnown RBP26.9■■□□□ 1.9
SREBF1-208ENST00000469356 BRI3BPQ8WY22 251 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 EMILIN3Q9NT22 766 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 PNMA3Q9UL41 463 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 AGTPBP1Q9UPW5 1226 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 SLC45A1Q9Y2W3 748 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 CCDC69A6NI79 296 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 WDR46O15213 610 aaKnown RBP26.9■■□□□ 1.9
SREBF1-208ENST00000469356 MAP2K1Q02750 393 aaPredicted RBP26.9■■□□□ 1.9
SREBF1-208ENST00000469356 SEC23AQ15436 765 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 SLFN13Q68D06 897 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 RCSD1Q6JBY9 416 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 NFXL1Q6ZNB6 911 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 IGDCC4Q8TDY8 1250 aa26.9■■□□□ 1.9
SREBF1-208ENST00000469356 OSBPP22059 807 aa26.89■■□□□ 1.89
SREBF1-208ENST00000469356 SYNE3Q6ZMZ3 975 aa26.89■■□□□ 1.89
SREBF1-208ENST00000469356 PNMA1Q8ND90 353 aa26.89■■□□□ 1.89
SREBF1-208ENST00000469356 NKX2-3Q8TAU0 364 aa26.89■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L15C9J2P7 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L13C9JLJ4 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L11C9JVI0 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L18D6R9N7 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L22D6RA61 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L17D6RBQ6 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L19D6RCP7 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L20D6RJB6 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 SH2B2O14492 632 aaPredicted RBP26.88■■□□□ 1.89
SREBF1-208ENST00000469356 USP17L24Q0WX57 530 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 CATIPQ7Z7H3 387 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 IFNL1Q8IU54 200 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 DCAF4Q8WV16 495 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 BEGAINQ9BUH8 593 aa26.88■■□□□ 1.89
SREBF1-208ENST00000469356 LOC285556D6RIA3 1793 aa26.87■■□□□ 1.89
SREBF1-208ENST00000469356 VCAM1P19320 739 aa26.87■■□□□ 1.89
SREBF1-208ENST00000469356 SLC1A4P43007 532 aa26.87■■□□□ 1.89
SREBF1-208ENST00000469356 DNAJC5GQ8N7S2 189 aa26.87■■□□□ 1.89
SREBF1-208ENST00000469356 GMCL1Q96IK5 515 aa26.87■■□□□ 1.89
SREBF1-208ENST00000469356 BTBD19C9JJ37 291 aa26.86■■□□□ 1.89
SREBF1-208ENST00000469356 NDUFB10O96000 172 aa26.86■■□□□ 1.89
SREBF1-208ENST00000469356 HOXA7P31268 230 aaPredicted RBP26.86■■□□□ 1.89
SREBF1-208ENST00000469356 IRX3P78415 501 aaPredicted RBP26.86■■□□□ 1.89
SREBF1-208ENST00000469356 FBXL16Q8N461 479 aa26.86■■□□□ 1.89
SREBF1-208ENST00000469356 TBC1D32Q96NH3 1257 aa26.86■■□□□ 1.89
SREBF1-208ENST00000469356 LY9Q9HBG7 655 aa26.86■■□□□ 1.89
SREBF1-208ENST00000469356 PDRG1Q9NUG6 133 aa26.86■■□□□ 1.89
SREBF1-208ENST00000469356 ISY1Q9ULR0 285 aaKnown RBP26.86■■□□□ 1.89
SREBF1-208ENST00000469356 CALM1P0DP23 149 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 CALM2P0DP24 149 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 CALM3P0DP25 149 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 BMP3P12645 472 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 MOGSQ13724 837 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 ANKRD1Q15327 319 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 Q6ZUG5 572 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 SPICE1Q8N0Z3 855 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 ZIC5Q96T25 663 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 LRRC2Q9BYS8 371 aa26.85■■□□□ 1.89
SREBF1-208ENST00000469356 RPAP3Q9H6T3 665 aaPredicted RBP26.85■■□□□ 1.89
SREBF1-208ENST00000469356 PDHXO00330 501 aa26.84■■□□□ 1.89
SREBF1-208ENST00000469356 GPAT2Q6NUI2 795 aa26.84■■□□□ 1.89
SREBF1-208ENST00000469356 SGMS1Q86VZ5 419 aa26.84■■□□□ 1.89
SREBF1-208ENST00000469356 PARK7Q99497 189 aaKnown RBP26.84■■□□□ 1.89
SREBF1-208ENST00000469356 UPF3BQ9BZI7 483 aaKnown RBP26.84■■□□□ 1.89
SREBF1-208ENST00000469356 TANGO6Q9C0B7 1094 aa26.84■■□□□ 1.89
SREBF1-208ENST00000469356 MTMR7Q9Y216 660 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms