RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 SH2D4AQ9H788 454 aa13.03□□□□□ -0.32
SNU13-206ENST00000469028 IL17RBQ9NRM6 502 aa13.03□□□□□ -0.32
SNU13-206ENST00000469028 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
SNU13-206ENST00000469028 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
SNU13-206ENST00000469028 CDC45O75419 566 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
SNU13-206ENST00000469028 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.33
SNU13-206ENST00000469028 NOVP48745 357 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 HERVK_113P62684 666 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 IMMTQ16891 758 aaKnown RBP13.02□□□□□ -0.33
SNU13-206ENST00000469028 MFSD6Q6ZSS7 791 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 OTOP1Q7RTM1 612 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 TNS4Q8IZW8 715 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
SNU13-206ENST00000469028 LPAR1Q92633 364 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 MAP4K1Q92918 833 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 MKL1Q969V6 931 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.33
SNU13-206ENST00000469028 TXNRD2Q9NNW7 524 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 TOMM22Q9NS69 142 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 TAF6LQ9Y6J9 622 aa13.02□□□□□ -0.33
SNU13-206ENST00000469028 RLFQ13129 1914 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 TTLL1O95922 423 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 CYP21A2P08686 494 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 FAM110CQ1W6H9 321 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 RNF41Q9H4P4 317 aaPredicted RBP13.01□□□□□ -0.33
SNU13-206ENST00000469028 RBPJLQ9UBG7 517 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 TRIM17Q9Y577 477 aa13.01□□□□□ -0.33
SNU13-206ENST00000469028 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
SNU13-206ENST00000469028 PARP14Q460N5 1801 aa13□□□□□ -0.33
SNU13-206ENST00000469028 A0A0G2JMZ2 1700 aa13□□□□□ -0.33
SNU13-206ENST00000469028 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
SNU13-206ENST00000469028 F5H6K3 240 aa13□□□□□ -0.33
SNU13-206ENST00000469028 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
SNU13-206ENST00000469028 CNMDO75829 334 aa13□□□□□ -0.33
SNU13-206ENST00000469028 NDUFB10O96000 172 aa13□□□□□ -0.33
SNU13-206ENST00000469028 GCLCP48506 637 aaPredicted RBP13□□□□□ -0.33
SNU13-206ENST00000469028 KLRC3Q07444 240 aa13□□□□□ -0.33
SNU13-206ENST00000469028 TRIM47Q96LD4 638 aa13□□□□□ -0.33
SNU13-206ENST00000469028 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
SNU13-206ENST00000469028 TANGO6Q9C0B7 1094 aa13□□□□□ -0.33
SNU13-206ENST00000469028 EFCC1Q9HA90 598 aa13□□□□□ -0.33
SNU13-206ENST00000469028 GOPCQ9HD26 462 aa13□□□□□ -0.33
SNU13-206ENST00000469028 SYNPO2Q9UMS6 1093 aa13□□□□□ -0.33
SNU13-206ENST00000469028 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
SNU13-206ENST00000469028 HTTP42858 3142 aa13□□□□□ -0.33
SNU13-206ENST00000469028 B4E1Z4 1266 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 RAD21O60216 631 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 KDM4AO75164 1064 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 PSMC4P43686 418 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 Q3C1V9 767 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 LBX2Q6XYB7 198 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 STOX1Q6ZVD7 989 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 RASGRP2Q7LDG7 609 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 GMCL1P1Q8NEA9 526 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 ESR2Q92731 530 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 FBXO28Q9NVF7 368 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 STX8Q9UNK0 236 aa12.99□□□□□ -0.33
SNU13-206ENST00000469028 MGAMO43451 1857 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 DSG3P32926 999 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 COG2Q14746 738 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 KIF22Q14807 665 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 RCSD1Q6JBY9 416 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 KIAA1211Q6ZU35 1233 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
SNU13-206ENST00000469028 ATG4CQ96DT6 458 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 PAGR1Q9BTK6 254 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 BTBD7Q9P203 1132 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 PTPN22Q9Y2R2 807 aa12.98□□□□□ -0.33
SNU13-206ENST00000469028 FLOT1O75955 427 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
SNU13-206ENST00000469028 FCGRTP55899 365 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 ERVK-9P63128 1117 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 ERVK-24P63145 666 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
SNU13-206ENST00000469028 SLFN13Q68D06 897 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 FBXO46Q6PJ61 603 aaPredicted RBP12.97□□□□□ -0.33
SNU13-206ENST00000469028 CYB5R4Q7L1T6 521 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 ABHD8Q96I13 439 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 TMEM47Q9BQJ4 181 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 PORCNQ9H237 461 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 ZSWIM5Q9P217 1185 aa12.97□□□□□ -0.33
SNU13-206ENST00000469028 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms