RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TRIM27P14373 513 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 SLC8A1P32418 973 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 USP5P45974 858 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 ETF1P62495 437 aaKnown RBP5.56□□□□□ -1.52
SF3B1-207ENST00000468925 KRT85P78386 507 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 IFFO1Q0D2I5 559 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 MTA1Q13330 715 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 OS9Q13438 667 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-207ENST00000468925 GRIK4Q16099 956 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 MAP9Q49MG5 647 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 FILIP1LQ4L180 1135 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 PRRT3Q5FWE3 981 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 RCSD1Q6JBY9 416 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 DPH6Q7L8W6 267 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 YTHDF3Q7Z739 585 aaKnown RBP5.56□□□□□ -1.52
SF3B1-207ENST00000468925 SDCCAG8Q86SQ7 713 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-207ENST00000468925 REXO1L1PQ8IX06 675 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 RPAP2Q8IXW5 612 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-207ENST00000468925 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 SIX5Q8N196 739 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 SPC24Q8NBT2 197 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 GOLGA1Q92805 767 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 STK31Q9BXU1 1019 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 LNPKQ9C0E8 428 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 GGA2Q9UJY4 613 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 RIPOR2Q9Y4F9 1068 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 CDK13Q14004 1512 aaKnown RBP5.56□□□□□ -1.52
SF3B1-207ENST00000468925 MAGI2Q86UL8 1455 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 KDM5AP29375 1690 aaKnown RBP5.56□□□□□ -1.52
SF3B1-207ENST00000468925 ADGRL3Q9HAR2 1447 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 MAP3K5Q99683 1374 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 NPHP3Q7Z494 1330 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 MAGI3Q5TCQ9 1506 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 KIAA1210Q9ULL0 1709 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 SHTN1A0MZ66 631 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 GOLGA6L4A6NEF3 574 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 SOWAHDA6NJG2 315 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 SRRM3A6NNA2 597 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 TADA3O75528 432 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 TBC1D8O95759 1140 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 APBA3O96018 575 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 EZRP15311 586 aaKnown RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 ARID4AP29374 1257 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 MAGEA8P43361 318 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 BIRC2Q13490 618 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 DCTN1Q14203 1278 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 PPP2R5AQ15172 486 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 ERCC6LQ2NKX8 1250 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 PREPLQ4J6C6 727 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 CRTC2Q53ET0 693 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 GORABQ5T7V8 394 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 WLSQ5T9L3 541 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 FAM43BQ6ZT52 329 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 LUZP1Q86V48 1076 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 C17orf53Q8N3J3 647 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 CHMP4CQ96CF2 233 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 API5Q9BZZ5 524 aaKnown RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 DCTPP1Q9H773 170 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 SH2B1Q9NRF2 756 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 ANKIB1Q9P2G1 1089 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 ZMIZ1Q9ULJ6 1067 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 PPME1Q9Y570 386 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 MAFBQ9Y5Q3 323 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-207ENST00000468925 PPIP5K1Q6PFW1 1433 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 IQGAP2Q13576 1575 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 SBNO2Q9Y2G9 1366 aa5.55□□□□□ -1.52
SF3B1-207ENST00000468925 TTC21BQ7Z4L5 1316 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 GOLGA6L7A0A1B0GV03 622 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 CBFA2T2O43439 604 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 STX6O43752 255 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 COQ9O75208 318 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 KIAA0754O94854 1291 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 DKK1O94907 266 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 F13A1P00488 732 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 HNRNPH1P31943 449 aaKnown RBP5.54□□□□□ -1.52
SF3B1-207ENST00000468925 INPP5BP32019 993 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 ZNF165P49910 485 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 CDR1P51861 262 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 NEK4P51957 841 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 GYS2P54840 703 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 SEC13P55735 322 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 ST5P78524 1137 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 APOBRQ0VD83 1088 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 DPYDQ12882 1025 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 TRAPPC3LQ5T215 181 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 TMEM164Q5U3C3 297 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 ATL3Q6DD88 541 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 LARP1Q6PKG0 1096 aaKnown RBP5.54□□□□□ -1.52
SF3B1-207ENST00000468925 KRT25Q7Z3Z0 450 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 BTLAQ7Z6A9 289 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 ANKRD23Q86SG2 305 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 TCP11L2Q8N4U5 519 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 ZGPATQ8N5A5 531 aaKnown RBP5.54□□□□□ -1.52
SF3B1-207ENST00000468925 PRPF38AQ8NAV1 312 aaKnown RBP5.54□□□□□ -1.52
SF3B1-207ENST00000468925 KLHL23Q8NBE8 558 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 CACTINQ8WUQ7 758 aaKnown RBP5.54□□□□□ -1.52
SF3B1-207ENST00000468925 RUBCNQ92622 972 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 P3H4Q92791 437 aa5.54□□□□□ -1.52
SF3B1-207ENST00000468925 ANKRD27Q96NW4 1050 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms