RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 A0A1W2PRG0 241 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 CALM1P0DP23 149 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 CALM2P0DP24 149 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 CALM3P0DP25 149 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 NF2P35240 595 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 RTN1Q16799 776 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 MTMR7Q9Y216 660 aa20.43■□□□□ 0.86
RPL39-202ENST00000468844 ECE1P42892 770 aa20.42■□□□□ 0.86
RPL39-202ENST00000468844 NTRK3Q16288 839 aa20.42■□□□□ 0.86
RPL39-202ENST00000468844 SCYL3Q8IZE3 742 aa20.42■□□□□ 0.86
RPL39-202ENST00000468844 NSUN7Q8NE18 718 aaKnown RBP20.42■□□□□ 0.86
RPL39-202ENST00000468844 CHMP4CQ96CF2 233 aa20.42■□□□□ 0.86
RPL39-202ENST00000468844 GINM1Q9NU53 330 aa20.42■□□□□ 0.86
RPL39-202ENST00000468844 JAK2O60674 1132 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 ACER1Q8TDN7 264 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 MAP3K14Q99558 947 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 GPBP1L1Q9HC44 474 aaPredicted RBP20.41■□□□□ 0.86
RPL39-202ENST00000468844 DHX16O60231 1041 aaKnown RBP20.41■□□□□ 0.86
RPL39-202ENST00000468844 PPFIA3O75145 1194 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 PDHBP11177 359 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 PPP2R5BQ15173 497 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.41■□□□□ 0.86
RPL39-202ENST00000468844 CTCFLQ8NI51 663 aaPredicted RBP20.41■□□□□ 0.86
RPL39-202ENST00000468844 SMARCC2Q8TAQ2 1214 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 MAD2L2Q9UI95 211 aa20.41■□□□□ 0.86
RPL39-202ENST00000468844 CPLX1O14810 134 aa20.4■□□□□ 0.86
RPL39-202ENST00000468844 SNHG28P0DPA3 235 aa20.4■□□□□ 0.86
RPL39-202ENST00000468844 GRM4Q14833 912 aa20.4■□□□□ 0.86
RPL39-202ENST00000468844 NOL9Q5SY16 702 aaKnown RBP20.4■□□□□ 0.86
RPL39-202ENST00000468844 MOB2Q70IA6 237 aa20.4■□□□□ 0.86
RPL39-202ENST00000468844 CMTR1Q8N1G2 835 aaKnown RBP20.4■□□□□ 0.86
RPL39-202ENST00000468844 LLPHQ9BRT6 129 aaKnown RBP20.4■□□□□ 0.86
RPL39-202ENST00000468844 ARHGEF10LQ9HCE6 1279 aa20.4■□□□□ 0.86
RPL39-202ENST00000468844 USP17L5A8MUK1 530 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 GJB2P29033 226 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 DDIT3P35638 169 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 VGLL4Q14135 290 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 MAP3K11Q16584 847 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 STAG2Q8N3U4 1231 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 RBM28Q9NW13 759 aaKnown RBP20.39■□□□□ 0.86
RPL39-202ENST00000468844 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 TMX2Q9Y320 296 aa20.39■□□□□ 0.86
RPL39-202ENST00000468844 CCDC196A0A1B0GTZ2 297 aa20.39■□□□□ 0.85
RPL39-202ENST00000468844 PTPDC1A2A3K4 754 aa20.39■□□□□ 0.85
RPL39-202ENST00000468844 PLEKHA8P1O95397 391 aa20.39■□□□□ 0.85
RPL39-202ENST00000468844 IREB2P48200 963 aaKnown RBP20.39■□□□□ 0.85
RPL39-202ENST00000468844 USP17L2Q6R6M4 530 aa20.39■□□□□ 0.85
RPL39-202ENST00000468844 SMCHD1A6NHR9 2005 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 PCNTO95613 3336 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 IFNAR1P17181 557 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 PTPRAP18433 802 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 MAP3K9P80192 1104 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 CHADLQ6NUI6 762 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 TMTC3Q6ZXV5 915 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 GMCL1P1Q8NEA9 526 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 PHKBQ93100 1093 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 ZNF408Q9H9D4 720 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 SYNPO2Q9UMS6 1093 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 SNCAIPQ9Y6H5 919 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 TCHHQ07283 1943 aa20.38■□□□□ 0.85
RPL39-202ENST00000468844 PALM3A6NDB9 673 aaPredicted RBP20.37■□□□□ 0.85
RPL39-202ENST00000468844 F5H6K3 240 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 ITGBL1O95965 494 aaPredicted RBP20.37■□□□□ 0.85
RPL39-202ENST00000468844 GOLGA8HP0CJ92 632 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 KIF5BP33176 963 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 KLRC3Q07444 240 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 TTLL12Q14166 644 aaPredicted RBP20.37■□□□□ 0.85
RPL39-202ENST00000468844 CCDC82Q8N4S0 544 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 DDX11Q96FC9 970 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 RAD21O60216 631 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
RPL39-202ENST00000468844 FDPSP14324 419 aaKnown RBP20.37■□□□□ 0.85
RPL39-202ENST00000468844 FUT2Q10981 343 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 NBPF11Q86T75 865 aa20.37■□□□□ 0.85
RPL39-202ENST00000468844 LOC285556D6RIA3 1793 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 KIF3CO14782 793 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 CDKL5O76039 1030 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 NDUFB10O96000 172 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 KIAA1755Q5JYT7 1200 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 SLFN13Q68D06 897 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 CPLX2Q6PUV4 134 aaKnown RBP20.36■□□□□ 0.85
RPL39-202ENST00000468844 ANKRD13AQ8IZ07 590 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 SRBD1Q8N5C6 995 aaKnown RBP20.36■□□□□ 0.85
RPL39-202ENST00000468844 CWC22Q9HCG8 908 aaKnown RBP20.36■□□□□ 0.85
RPL39-202ENST00000468844 RLFQ13129 1914 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 FRMPD2Q68DX3 1309 aaPredicted RBP20.36■□□□□ 0.85
RPL39-202ENST00000468844 CNTNAP5Q8WYK1 1306 aa20.36■□□□□ 0.85
RPL39-202ENST00000468844 HMGN5P82970 282 aaKnown RBP20.35■□□□□ 0.85
RPL39-202ENST00000468844 ZYXQ15942 572 aaKnown RBP20.35■□□□□ 0.85
RPL39-202ENST00000468844 CLMNQ96JQ2 1002 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 SH2D4AQ9H788 454 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 CSADQ9Y600 493 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 MYH15Q9Y2K3 1946 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 UBE2Q2LH0YL09 131 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 ZNF543Q08ER8 600 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 SPICE1Q8N0Z3 855 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 WDR18Q9BV38 432 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 CPVLQ9H3G5 476 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms