RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 XRCC5P13010 732 aaKnown RBP8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 CAPN2P17655 700 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 RGS2P41220 211 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 TDO2P48775 406 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 LBX2Q6XYB7 198 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 SIAH1Q8IUQ4 282 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 TRMT44Q8IYL2 757 aaKnown RBP8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 SPICE1Q8N0Z3 855 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 DPF3Q92784 378 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 SHISA4Q96DD7 197 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 NACAP1Q9BZK3 213 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 RWDD1Q9H446 243 aaPredicted RBP8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 ZNF287Q9HBT7 754 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 HMX1Q9NP08 348 aaPredicted RBP8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 TMX2Q9Y320 296 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
SNRPD3-205ENST00000468770 BAZ2AQ9UIF9 1905 aaKnown RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 RPTORQ8N122 1335 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 DDX60LQ5H9U9 1706 aaKnown RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 M0R2C6 588 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 CNMDO75829 334 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 FLOT1O75955 427 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 FARP2O94887 1054 aaPredicted RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 EEF2P13639 858 aaKnown RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 ZKSCAN1P17029 563 aaPredicted RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 TRIM32Q13049 653 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 KIAA1755Q5JYT7 1200 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 MORN1Q5T089 497 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 SAMD1Q6SPF0 538 aaPredicted RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 CLEC10AQ8IUN9 316 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 IFNL3Q8IZI9 196 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 ZNF444Q8N0Y2 327 aaPredicted RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 TRIB2Q92519 343 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 SEC62Q99442 399 aaKnown RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 HTATIP2Q9BUP3 242 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 VCPKMTQ9H867 229 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 PAK6Q9NQU5 681 aaPredicted RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 BTBD7Q9P203 1132 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 MYH7P12883 1935 aa8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 MKI67P46013 3256 aaKnown RBP8.58□□□□□ -1.04
SNRPD3-205ENST00000468770 SLC15A5A6NIM6 579 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 WDR46O15213 610 aaKnown RBP8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 SLC3A2P08195 630 aaKnown RBP8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 PTPREP23469 700 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 DSG3P32926 999 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 PDE1AP54750 535 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 PLS1Q14651 629 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 ZMYM1Q5SVZ6 1142 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 MB21D1Q8N884 522 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 USP6NLQ92738 828 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 EVI5LQ96CN4 794 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 APBA2Q99767 749 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 SPATC1LQ9H0A9 340 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 NAPBQ9H115 298 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 EPB41L4AQ9HCS5 686 aaPredicted RBP8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 GOPCQ9HD26 462 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 STAP2Q9UGK3 403 aa8.57□□□□□ -1.04
SNRPD3-205ENST00000468770 STRNO43815 780 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 PRDM1O75626 825 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 ERCC3P19447 782 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 RASA1P20936 1047 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 PDE4BQ07343 736 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 CACNB2Q08289 660 aaPredicted RBP8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 CCL14Q16627 93 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 MFSD14CQ5VZR4 134 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 UBE2Q1Q7Z7E8 422 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 DPP9Q86TI2 863 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 ATG4CQ96DT6 458 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 MOV10L1Q9BXT6 1211 aaKnown RBP8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 LNPKQ9C0E8 428 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 CRISPLD2Q9H0B8 497 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 NYAP2Q9P242 653 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 CLIP2Q9UDT6 1046 aa8.56□□□□□ -1.04
SNRPD3-205ENST00000468770 SALL3Q9BXA9 1300 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 MYH8P13535 1937 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 TRIM6-TRIM34B2RNG4 842 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 F5H6K3 240 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 H0YGN5 161 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 TSPY3P0CV98 308 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 TSPY8P0CW00 308 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 KLRC3Q07444 240 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 PPARAQ07869 468 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 GRB14Q14449 540 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 FAM83BQ5T0W9 1011 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 MAP3K21Q5TCX8 1036 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 CCDC129Q6ZRS4 1044 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 NECAB2Q7Z6G3 386 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 NCAPG2Q86XI2 1143 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 SMC5Q8IY18 1101 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 SHCBP1Q8NEM2 672 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 EXOC6Q8TAG9 804 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 PAWRQ96IZ0 340 aaKnown RBP8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 MROH8Q9H579 483 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms