RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 KCNK4Q9NYG8 393 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 SAMM50Q9Y512 469 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 SLIT2O94813 1529 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 BCL9LQ86UU0 1499 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 EDC4Q6P2E9 1401 aaKnown RBP6.85□□□□□ -1.31
U2AF1-207ENST00000468039 BRD4O60885 1362 aaPredicted RBP6.85□□□□□ -1.31
U2AF1-207ENST00000468039 NINLQ9Y2I6 1382 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 MARF1Q9Y4F3 1742 aaKnown RBP6.85□□□□□ -1.31
U2AF1-207ENST00000468039 TTC21AQ8NDW8 1320 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 PLCH1Q4KWH8 1693 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 F8W735 103 aaPredicted RBP6.85□□□□□ -1.31
U2AF1-207ENST00000468039 SORBS3O60504 671 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 IREB2P48200 963 aaKnown RBP6.85□□□□□ -1.31
U2AF1-207ENST00000468039 POU4F3Q15319 338 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.85□□□□□ -1.31
U2AF1-207ENST00000468039 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 UBASH3BQ8TF42 649 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 CEP41Q9BYV8 373 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 RNF208Q9H0X6 261 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 PRDM11Q9NQV5 511 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 TTF2Q9UNY4 1162 aaKnown RBP6.85□□□□□ -1.31
U2AF1-207ENST00000468039 SLIT3O75094 1523 aa6.85□□□□□ -1.31
U2AF1-207ENST00000468039 ATRNO75882 1429 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 NSD3Q9BZ95 1437 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 KIF7Q2M1P5 1343 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 ADAM11O75078 769 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 GCP02774 474 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 GLB1P16278 677 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 FAAP100Q0VG06 881 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 TPTE2Q6XPS3 522 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 AGGF1Q8N302 714 aaeCLIP6.84□□□□□ -1.31
U2AF1-207ENST00000468039 C3orf58Q8NDZ4 430 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 BTG4Q9NY30 223 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 VTI1BQ9UEU0 232 aa6.84□□□□□ -1.31
U2AF1-207ENST00000468039 OVOS2A0A0J9YW53 1432 aa6.84□□□□□ -1.32
U2AF1-207ENST00000468039 OVOS2Q6IE36 1432 aa6.84□□□□□ -1.32
U2AF1-207ENST00000468039 USP31Q70CQ4 1352 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 COL14A1Q05707 1796 aaKnown RBP6.83□□□□□ -1.32
U2AF1-207ENST00000468039 NFAT5O94916 1531 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 SART1O43290 800 aaKnown RBP6.83□□□□□ -1.32
U2AF1-207ENST00000468039 ALX3O95076 343 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 WISP1O95388 367 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 FBLN1P23142 703 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 MAOBP27338 520 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 RXRBP28702 533 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 NOS3P29474 1203 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 FDX2Q6P4F2 183 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 UNC5CLQ8IV45 518 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 EMILIN2Q9BXX0 1053 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 PANK3Q9H999 370 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 CYP4F12Q9HCS2 524 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 TRPC5Q9UL62 973 aaPredicted RBP6.83□□□□□ -1.32
U2AF1-207ENST00000468039 NRAPQ86VF7 1730 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 RGS12O14924 1447 aa6.83□□□□□ -1.32
U2AF1-207ENST00000468039 CPDO75976 1380 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 WASHC2AQ641Q2 1341 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 LOC100289279A0A1B0GTE1 492 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 TM4SF5O14894 197 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 TAGLNQ01995 201 aaKnown RBP6.82□□□□□ -1.32
U2AF1-207ENST00000468039 PDE3AQ14432 1141 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 EXOSC6Q5RKV6 272 aaKnown RBP6.82□□□□□ -1.32
U2AF1-207ENST00000468039 LCE5AQ5TCM9 118 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 ANKRD34AQ69YU3 496 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 KIAA1211Q6ZU35 1233 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 FAM161BQ96MY7 647 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 RAD18Q9NS91 495 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 RNF19AQ9NV58 838 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 GLI3P10071 1580 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 CCDC7Q96M83 1385 aa6.82□□□□□ -1.32
U2AF1-207ENST00000468039 CAMTA1Q9Y6Y1 1673 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 FYB1O15117 783 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 NME2P22392 152 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 RBM6P78332 1123 aaKnown RBP6.81□□□□□ -1.32
U2AF1-207ENST00000468039 VPS72Q15906 364 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 SULF2Q8IWU5 870 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 KCNH5Q8NCM2 988 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 ANKRD24Q8TF21 1146 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 TP53INP1Q96A56 240 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 COG3Q96JB2 828 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 NECAB3Q96P71 396 aaPredicted RBP6.81□□□□□ -1.32
U2AF1-207ENST00000468039 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
U2AF1-207ENST00000468039 CBX8Q9HC52 389 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.81□□□□□ -1.32
U2AF1-207ENST00000468039 NWD2Q9ULI1 1742 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 USP54Q70EL1 1684 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 LMO7Q8WWI1 1683 aa6.81□□□□□ -1.32
U2AF1-207ENST00000468039 MEGF11A6BM72 1044 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 FBXO24O75426 580 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 EVA1CP58658 441 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 CNGB1Q14028 1251 aaPredicted RBP6.8□□□□□ -1.32
U2AF1-207ENST00000468039 RRS1Q15050 365 aaKnown RBP6.8□□□□□ -1.32
U2AF1-207ENST00000468039 SV2BQ7L1I2 683 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 ARHGEF25Q86VW2 580 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
U2AF1-207ENST00000468039 IGSF5Q9NSI5 407 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 USP35Q9P2H5 1018 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 KIF20BQ96Q89 1820 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 AATKQ6ZMQ8 1374 aa6.8□□□□□ -1.32
U2AF1-207ENST00000468039 COL5A2P05997 1499 aaPredicted RBP6.79□□□□□ -1.32
U2AF1-207ENST00000468039 GAS2O43903 313 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms