RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 MAP3K9P80192 1104 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 ZNF654Q8IZM8 581 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 LRRC47Q8N1G4 583 aaKnown RBP8.02□□□□□ -1.13
SCAF4-204ENST00000467731 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 ANKS1AQ92625 1134 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 TMX3Q96JJ7 454 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 IPO9Q96P70 1041 aaKnown RBP8.02□□□□□ -1.13
SCAF4-204ENST00000467731 A0A1W2PRG0 241 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 GOLGA8BA8MQT2 603 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 TOMM70O94826 608 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 PDIA3P30101 505 aaKnown RBP8.02□□□□□ -1.13
SCAF4-204ENST00000467731 ECE1P42892 770 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 TROAPQ12815 778 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 NOL9Q5SY16 702 aaKnown RBP8.02□□□□□ -1.13
SCAF4-204ENST00000467731 ARMC9Q7Z3E5 817 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 ANKRD13AQ8IZ07 590 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 CHMP4CQ96CF2 233 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 ZNF274Q96GC6 653 aaPredicted RBP8.02□□□□□ -1.13
SCAF4-204ENST00000467731 GBA2Q9HCG7 927 aaPredicted RBP8.02□□□□□ -1.13
SCAF4-204ENST00000467731 PICK1Q9NRD5 415 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 NYAP2Q9P242 653 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 MTMR7Q9Y216 660 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 CSADQ9Y600 493 aa8.02□□□□□ -1.13
SCAF4-204ENST00000467731 TOP1P11387 765 aaKnown RBP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 PTPRAP18433 802 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 BECN1Q14457 450 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 PPP4R3BQ5MIZ7 849 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 CST9Q5W186 159 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 RASGRP2Q7LDG7 609 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 CATIPQ7Z7H3 387 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 CCDC144CPQ8IYA2 1237 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 SMC1BQ8NDV3 1235 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 ACER1Q8TDN7 264 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 NUP133Q8WUM0 1156 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 CLMNQ96JQ2 1002 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 GINM1Q9NU53 330 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 HPS5Q9UPZ3 1129 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 SNCAIPQ9Y6H5 919 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 PASKQ96RG2 1323 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 USP17L5A8MUK1 530 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 UBE2Q2LH0YL09 131 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 ZBTB43O43298 467 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 SCRN1Q12765 414 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 SYNE3Q6ZMZ3 975 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 NECAB1Q8N987 351 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 MKL1Q969V6 931 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 ZSCAN31Q96LW9 406 aaPredicted RBP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 SLKQ9H2G2 1235 aaPredicted RBP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 NCOA5Q9HCD5 579 aaKnown RBP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 SH2B1Q9NRF2 756 aaPredicted RBP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 CEP350Q5VT06 3117 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 MYH6P13533 1939 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 RAD21O60216 631 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 SLC4A3P48751 1232 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 METAP2P50579 478 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 FKBP1BP68106 108 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 ST3GAL1Q11201 340 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 GSE1Q14687 1217 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCAF4-204ENST00000467731 GTF3C6Q969F1 213 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 ELP3Q9H9T3 547 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 TMX2Q9Y320 296 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 ZHX2Q9Y6X8 837 aa8.01□□□□□ -1.13
SCAF4-204ENST00000467731 PFKFB2O60825 505 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 DDAH1O94760 285 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 CDC27P30260 824 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 ZYXQ15942 572 aaKnown RBP8□□□□□ -1.13
SCAF4-204ENST00000467731 LDLRAD1Q5T700 205 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 CCDC83Q8IWF9 413 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 C2orf69Q8N8R5 385 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 RBM46Q8TBY0 533 aaKnown RBP8□□□□□ -1.13
SCAF4-204ENST00000467731 TRIM75PA6NK02 468 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 GOLGA8AA7E2F4 631 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 DTNBO60941 627 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 PDHBP11177 359 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 ADD1P35611 737 aaKnown RBP8□□□□□ -1.13
SCAF4-204ENST00000467731 RCAN1P53805 252 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 SPP2Q13103 211 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 FANCBQ8NB91 859 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 ZNF280CQ8ND82 737 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 FEZ1Q99689 392 aa8□□□□□ -1.13
SCAF4-204ENST00000467731 F5H6K3 240 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 KLRC3Q07444 240 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 DGKZQ13574 1117 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 MTMR2Q13614 643 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 USP17L2Q6R6M4 530 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 SPICE1Q8N0Z3 855 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 SPRYD3Q8NCJ5 442 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 OTUD5Q96G74 571 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 PDCL3Q9H2J4 239 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 SH2D4AQ9H788 454 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 AS3MTQ9HBK9 375 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 FAM217BQ9NTX9 383 aaPredicted RBP7.99□□□□□ -1.13
SCAF4-204ENST00000467731 NID2Q14112 1375 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 CALM1P0DP23 149 aa7.99□□□□□ -1.13
SCAF4-204ENST00000467731 CALM2P0DP24 149 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms