RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 DNAJC2Q99543 621 aaKnown RBP13.14□□□□□ -0.31
PRPF3-203ENST00000467514 FEZ1Q99689 392 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 PORCNQ9H237 461 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 TXNRD2Q9NNW7 524 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 DIAPH3Q9NSV4 1193 aa13.14□□□□□ -0.31
PRPF3-203ENST00000467514 DDX20Q9UHI6 824 aaKnown RBP13.14□□□□□ -0.31
PRPF3-203ENST00000467514 RAD50Q92878 1312 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 GPR75-ASB3A0A0A6YYF3 556 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 DNM1LO00429 736 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 GOLIM4O00461 696 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 GDF11O95390 407 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 MAP2K5Q13163 448 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
PRPF3-203ENST00000467514 SHHQ15465 462 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
PRPF3-203ENST00000467514 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
PRPF3-203ENST00000467514 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 NPM3O75607 178 aaKnown RBP13.12□□□□□ -0.31
PRPF3-203ENST00000467514 HOXA7P31268 230 aaPredicted RBP13.12□□□□□ -0.31
PRPF3-203ENST00000467514 ZAP70P43403 619 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 RHBDL3P58872 404 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 ZYXQ15942 572 aaKnown RBP13.12□□□□□ -0.31
PRPF3-203ENST00000467514 C9orf50Q5SZB4 431 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
PRPF3-203ENST00000467514 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 RUFY2Q8WXA3 655 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 LPAR1Q92633 364 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 WDR18Q9BV38 432 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
PRPF3-203ENST00000467514 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
PRPF3-203ENST00000467514 SPTBN5Q9NRC6 3674 aaKnown RBP13.11□□□□□ -0.31
PRPF3-203ENST00000467514 TMEM265A0A087WTH1 108 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 TNFRSF10AO00220 468 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 CHGBP05060 677 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 CYP2E1P05181 493 aaPredicted RBP13.11□□□□□ -0.31
PRPF3-203ENST00000467514 SMAD3P84022 425 aaKnown RBP13.11□□□□□ -0.31
PRPF3-203ENST00000467514 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 ZMYM1Q5SVZ6 1142 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 MORN1Q5T089 497 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
PRPF3-203ENST00000467514 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 BADQ92934 168 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 DDRGK1Q96HY6 314 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 RNPC3Q96LT9 517 aaKnown RBP13.11□□□□□ -0.31
PRPF3-203ENST00000467514 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
PRPF3-203ENST00000467514 LRP2BPQ9P2M1 347 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 RBPJLQ9UBG7 517 aa13.11□□□□□ -0.31
PRPF3-203ENST00000467514 BAG3O95817 575 aa13.1□□□□□ -0.31
PRPF3-203ENST00000467514 HLA-DOAP06340 250 aa13.1□□□□□ -0.31
PRPF3-203ENST00000467514 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
PRPF3-203ENST00000467514 Q3C1V9 767 aa13.1□□□□□ -0.31
PRPF3-203ENST00000467514 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
PRPF3-203ENST00000467514 USP6NLQ92738 828 aa13.1□□□□□ -0.31
PRPF3-203ENST00000467514 KCNB2Q92953 911 aa13.1□□□□□ -0.31
PRPF3-203ENST00000467514 SLC15A5A6NIM6 579 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
PRPF3-203ENST00000467514 PLCG2P16885 1265 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 CYP2C19P33261 490 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 HSPA4P34932 840 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 DPP9Q86TI2 863 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 MAPKAPK5Q8IW41 473 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 SPATA5Q8NB90 893 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
PRPF3-203ENST00000467514 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 TTYH1Q9H313 450 aaPredicted RBP13.09□□□□□ -0.31
PRPF3-203ENST00000467514 ANO2Q9NQ90 1003 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
PRPF3-203ENST00000467514 AATFQ9NY61 560 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRPF3-203ENST00000467514 ZBTB21Q9ULJ3 1066 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 RABGAP1Q9Y3P9 1069 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
PRPF3-203ENST00000467514 TTC28Q96AY4 2481 aa13.08□□□□□ -0.31
PRPF3-203ENST00000467514 RLFQ13129 1914 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L15C9J2P7 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L11C9JVI0 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L18D6R9N7 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L22D6RA61 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L19D6RCP7 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L20D6RJB6 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 ZFYP08048 801 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-203ENST00000467514 ANAPC15P60006 121 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 PTH1RQ03431 593 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 USP17L24Q0WX57 530 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-203ENST00000467514 NAA16Q6N069 864 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-203ENST00000467514 SLC39A5Q6ZMH5 540 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 ZNF589Q86UQ0 364 aaPredicted RBP13.08□□□□□ -0.32
PRPF3-203ENST00000467514 TGFBRAP1Q8WUH2 860 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 FERMT2Q96AC1 680 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms