RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
DDX56-208ENST00000467318 KIAA1683Q9H0B3 1180 aa17.27■□□□□ 0.36
DDX56-208ENST00000467318 KAT14Q9H8E8 782 aa17.27■□□□□ 0.36
DDX56-208ENST00000467318 A0A1W2PRG0 241 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 IRF6O14896 467 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 ECE1P42892 770 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 ACER1Q8TDN7 264 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 FEZ1Q99689 392 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 GOPCQ9HD26 462 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 KCNH4Q9UQ05 1017 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 TRIM75PA6NK02 468 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 NFXL1Q6ZNB6 911 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 PNMA1Q8ND90 353 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 BRF1Q92994 677 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 WNK4Q96J92 1243 aa17.26■□□□□ 0.35
DDX56-208ENST00000467318 EVCP57679 992 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 MTMR2Q13614 643 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 TOB2Q14106 344 aaPredicted RBP17.25■□□□□ 0.35
DDX56-208ENST00000467318 SPRYD7Q5W111 196 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 SYNE3Q6ZMZ3 975 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 LPAR1Q92633 364 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 SNX21Q969T3 373 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 GPHNQ9NQX3 736 aaPredicted RBP17.25■□□□□ 0.35
DDX56-208ENST00000467318 SLC12A7Q9Y666 1083 aa17.25■□□□□ 0.35
DDX56-208ENST00000467318 RASSF10A6NK89 507 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 F5H6K3 240 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 AK2P54819 239 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 KLRC3Q07444 240 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 SNAPC2Q13487 334 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 SH3D19Q5HYK7 790 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 LRRC47Q8N1G4 583 aaKnown RBP17.24■□□□□ 0.35
DDX56-208ENST00000467318 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
DDX56-208ENST00000467318 GJA5P36382 358 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 MCM2P49736 904 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 GTF2A2P52657 109 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 RCAN1P53805 252 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 RASAL3Q86YV0 1011 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 C12orf42Q96LP6 360 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 MAP3K14Q99558 947 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 SENP2Q9HC62 589 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 MYH4Q9Y623 1939 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 A0A0G2JLL6 359 aaPredicted RBP17.23■□□□□ 0.35
DDX56-208ENST00000467318 DDAH1O94760 285 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 SLC10A3P09131 477 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 CALM1P0DP23 149 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 CALM2P0DP24 149 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 CALM3P0DP25 149 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 TROAPQ12815 778 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 APOA5Q6Q788 366 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 FASTKD5Q7L8L6 764 aaKnown RBP17.23■□□□□ 0.35
DDX56-208ENST00000467318 PRRT2Q7Z6L0 340 aaPredicted RBP17.23■□□□□ 0.35
DDX56-208ENST00000467318 ZNF654Q8IZM8 581 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 ZNF274Q96GC6 653 aaPredicted RBP17.23■□□□□ 0.35
DDX56-208ENST00000467318 TMOD4Q9NZQ9 345 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 CHMP5Q9NZZ3 219 aa17.23■□□□□ 0.35
DDX56-208ENST00000467318 KLF18A0A0U1RQI7 1052 aa17.22■□□□□ 0.35
DDX56-208ENST00000467318 HMGCS2P54868 508 aa17.22■□□□□ 0.35
DDX56-208ENST00000467318 APOBRQ0VD83 1088 aa17.22■□□□□ 0.35
DDX56-208ENST00000467318 MKRN3Q13064 507 aaKnown RBP17.22■□□□□ 0.35
DDX56-208ENST00000467318 PPP2R5BQ15173 497 aa17.22■□□□□ 0.35
DDX56-208ENST00000467318 SLFN13Q68D06 897 aa17.22■□□□□ 0.35
DDX56-208ENST00000467318 PROCA1Q8NCQ7 364 aaPredicted RBP17.22■□□□□ 0.35
DDX56-208ENST00000467318 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
DDX56-208ENST00000467318 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
DDX56-208ENST00000467318 ZBTB43O43298 467 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 RAD21O60216 631 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 NDUFB10O96000 172 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 SNHG28P0DPA3 235 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 PDHBP11177 359 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 CETPP11597 493 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
DDX56-208ENST00000467318 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 MS4A4AQ96JQ5 239 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
DDX56-208ENST00000467318 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
DDX56-208ENST00000467318 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
DDX56-208ENST00000467318 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
DDX56-208ENST00000467318 SLC1A4P43007 532 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 INHBEP58166 350 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 DGKZQ13574 1117 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 PAXIP1Q6ZW49 1069 aaPredicted RBP17.2■□□□□ 0.34
DDX56-208ENST00000467318 MANSC4A6NHS7 340 aaPredicted RBP17.2■□□□□ 0.34
DDX56-208ENST00000467318 HSPA6P17066 643 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 PDIA3P30101 505 aaKnown RBP17.2■□□□□ 0.34
DDX56-208ENST00000467318 KIF5BP33176 963 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 NOGQ13253 232 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
DDX56-208ENST00000467318 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 SPICE1Q8N0Z3 855 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 NUP133Q8WUM0 1156 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms