RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
NUP188-204ENST00000467044 A0A1W2PRG0 241 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 K7ELQ4 463 aaPredicted RBP12.56□□□□□ -0.4
NUP188-204ENST00000467044 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
NUP188-204ENST00000467044 NOVP48745 357 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 CCT2P78371 535 aaKnown RBP12.56□□□□□ -0.4
NUP188-204ENST00000467044 FSTL1Q12841 308 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 SPP2Q13103 211 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 ME3Q16798 604 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 LDLRAD1Q5T700 205 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 MKL1Q969V6 931 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
NUP188-204ENST00000467044 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 SLKQ9H2G2 1235 aaPredicted RBP12.56□□□□□ -0.4
NUP188-204ENST00000467044 SH2D4AQ9H788 454 aa12.56□□□□□ -0.4
NUP188-204ENST00000467044 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
NUP188-204ENST00000467044 TRIM75PA6NK02 468 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 GOLGA8AA7E2F4 631 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 DDAH1O94760 285 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 LARGE1O95461 756 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 CALM1P0DP23 149 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 CALM2P0DP24 149 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 CALM3P0DP25 149 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
NUP188-204ENST00000467044 HUNKP57058 714 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 EVCP57679 992 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 SLFN13Q68D06 897 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 ERO1BQ86YB8 467 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 WDR18Q9BV38 432 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
NUP188-204ENST00000467044 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
NUP188-204ENST00000467044 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 UNCXA6NJT0 531 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 F5H6K3 240 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 PPATQ06203 517 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 KLRC3Q07444 240 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 MTMR2Q13614 643 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 RTN1Q16799 776 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 CTCFLQ8NI51 663 aaPredicted RBP12.54□□□□□ -0.4
NUP188-204ENST00000467044 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 DAXXQ9UER7 740 aaPredicted RBP12.54□□□□□ -0.4
NUP188-204ENST00000467044 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
NUP188-204ENST00000467044 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
NUP188-204ENST00000467044 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 TMEM88BA6NKF7 163 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 PFKFB2O60825 505 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 NDUFB10O96000 172 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
NUP188-204ENST00000467044 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
NUP188-204ENST00000467044 KIF5BP33176 963 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 USP14P54578 494 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 BACE1P56817 501 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 SCRN1Q12765 414 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 TROAPQ12815 778 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 CCDC96Q2M329 555 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 RASGRP2Q7LDG7 609 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 KIAA1683Q9H0B3 1180 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 NCOA5Q9HCD5 579 aaKnown RBP12.53□□□□□ -0.4
NUP188-204ENST00000467044 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
NUP188-204ENST00000467044 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
NUP188-204ENST00000467044 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 CPLX1O14810 134 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 IRF6O14896 467 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 DHX16O60231 1041 aaKnown RBP12.52□□□□□ -0.41
NUP188-204ENST00000467044 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 PDHBP11177 359 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 CDC27P30260 824 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.41
NUP188-204ENST00000467044 SLC1A4P43007 532 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 SLC4A3P48751 1232 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 ZNF157P51786 506 aaPredicted RBP12.52□□□□□ -0.41
NUP188-204ENST00000467044 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
NUP188-204ENST00000467044 PPIL2Q13356 520 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 DGKZQ13574 1117 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 GRM4Q14833 912 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 KIAA1755Q5JYT7 1200 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 KCTD1Q719H9 257 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 DCAF4Q8WV16 495 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 GTF3C6Q969F1 213 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 NUP88Q99567 741 aaPredicted RBP12.52□□□□□ -0.41
NUP188-204ENST00000467044 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
NUP188-204ENST00000467044 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
NUP188-204ENST00000467044 SYNPO2Q9UMS6 1093 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms