RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 XPNPEP3Q9NQH7 507 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 MSRAQ9UJ68 235 aa18.18■□□□□ 0.5
HMGXB4-206ENST00000466438 DCDC2CA8MYV0 355 aa18.17■□□□□ 0.5
HMGXB4-206ENST00000466438 ZYXQ15942 572 aaKnown RBP18.17■□□□□ 0.5
HMGXB4-206ENST00000466438 PRAMEF19Q5SWL8 479 aa18.17■□□□□ 0.5
HMGXB4-206ENST00000466438 MFSD5Q6N075 450 aa18.17■□□□□ 0.5
HMGXB4-206ENST00000466438 C16orf59Q7L2K0 433 aa18.17■□□□□ 0.5
HMGXB4-206ENST00000466438 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
HMGXB4-206ENST00000466438 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
HMGXB4-206ENST00000466438 SPDYE16A6NNV3 312 aaPredicted RBP18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 ERC2O15083 957 aa18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 RARBP10826 455 aa18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 VCAM1P19320 739 aa18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 IL15P40933 162 aaPredicted RBP18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 SH3RF3Q8TEJ3 882 aaPredicted RBP18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 SLC28A3Q9HAS3 691 aa18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 C11orf16Q9NQ32 467 aa18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 TBX21Q9UL17 535 aa18.16■□□□□ 0.5
HMGXB4-206ENST00000466438 COBLO75128 1261 aa18.15■□□□□ 0.5
HMGXB4-206ENST00000466438 USP14P54578 494 aa18.15■□□□□ 0.5
HMGXB4-206ENST00000466438 PSRC1Q6PGN9 363 aaPredicted RBP18.15■□□□□ 0.5
HMGXB4-206ENST00000466438 HERVK_113Q902F9 699 aa18.15■□□□□ 0.5
HMGXB4-206ENST00000466438 NKX2-4Q9H2Z4 354 aa18.15■□□□□ 0.5
HMGXB4-206ENST00000466438 PGK1P00558 417 aa18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 MICALL1Q8N3F8 863 aa18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 SHCBP1Q8NEM2 672 aa18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 NOL10Q9BSC4 688 aaKnown RBP18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 MOV10L1Q9BXT6 1211 aaKnown RBP18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 KIAA1683Q9H0B3 1180 aa18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 NRBP1Q9UHY1 535 aa18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 ROBO3Q96MS0 1386 aa18.14■□□□□ 0.49
HMGXB4-206ENST00000466438 GH2P01242 217 aa18.13■□□□□ 0.49
HMGXB4-206ENST00000466438 MAML3Q96JK9 1138 aa18.13■□□□□ 0.49
HMGXB4-206ENST00000466438 STARD7Q9NQZ5 370 aa18.13■□□□□ 0.49
HMGXB4-206ENST00000466438 RAI14Q9P0K7 980 aa18.13■□□□□ 0.49
HMGXB4-206ENST00000466438 FLT1P17948 1338 aa18.13■□□□□ 0.49
HMGXB4-206ENST00000466438 FAM86C2PA6NEL3 165 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 CSF2RAP15509 400 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 ERCC3P19447 782 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 MRE11P49959 708 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 TIMM10P62072 90 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 SKIV2LQ15477 1246 aaKnown RBP18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 ZNF365Q70YC5 407 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 MAPKAPK5Q8IW41 473 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 ABRAQ8N0Z2 381 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 TMEM199Q8N511 208 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 NUP133Q8WUM0 1156 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 TSEN34Q9BSV6 310 aaKnown RBP18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 RPAP3Q9H6T3 665 aaPredicted RBP18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 HMG20BQ9P0W2 317 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 PALD1Q9ULE6 856 aa18.12■□□□□ 0.49
HMGXB4-206ENST00000466438 PLCG2P16885 1265 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 TBC1D9Q6ZT07 1266 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 TGFBRAP1Q8WUH2 860 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 XAGE2Q96GT9 111 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 SPATC1LQ9H0A9 340 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 MTIF3Q9H2K0 278 aaKnown RBP18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 YBX2Q9Y2T7 364 aaKnown RBP18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 MROH7Q68CQ1 1323 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 LRRC37A2A6NM11 1700 aa18.11■□□□□ 0.49
HMGXB4-206ENST00000466438 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 GBF1Q92538 1859 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 FOCADQ5VW36 1801 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 BAG3O95817 575 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 HLA-DOAP06340 250 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 ACRP10323 421 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 ACLYP53396 1101 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 SPATA5Q8NB90 893 aa18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 KHSRPQ92945 711 aaKnown RBP eCLIP18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 YTHDC1Q96MU7 727 aaKnown RBP18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 AATFQ9NY61 560 aaKnown RBP eCLIP18.1■□□□□ 0.49
HMGXB4-206ENST00000466438 CDK5RAP2Q96SN8 1893 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 A0A0G2JMZ2 1700 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 PTPRCP08575 1304 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 MOXD2PA6NHM9 499 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 TLL1O43897 1013 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 ADAMTS4O75173 837 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 PI16Q6UXB8 463 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 MROH8Q9H579 483 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 COG5Q9UP83 839 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 PA2G4Q9UQ80 394 aaKnown RBP18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 U3KPZ7 1027 aaPredicted RBP18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 TRANK1O15050 2925 aa18.09■□□□□ 0.49
HMGXB4-206ENST00000466438 SMIM22K7EJ46 135 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 APBB1O00213 710 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 AKR1A1P14550 325 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 COG2Q14746 738 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 RAB3GAP1Q15042 981 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 PPP2R2DQ66LE6 453 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 TATDN1Q6P1N9 297 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 ACER1Q8TDN7 264 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 AKAP2Q9Y2D5 859 aa18.08■□□□□ 0.48
HMGXB4-206ENST00000466438 PI4K2BG5E9Z4 385 aa18.07■□□□□ 0.48
HMGXB4-206ENST00000466438 PPP4CP60510 307 aa18.07■□□□□ 0.48
HMGXB4-206ENST00000466438 CCDC184Q52MB2 194 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms