RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 SMCR8Q8TEV9 937 aaPredicted RBP8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 LPIN2Q92539 896 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 ITFG2Q969R8 447 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 NBPF3Q9H094 633 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 C11orf49Q9H6J7 331 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 DAGLAQ9Y4D2 1042 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 AK9Q5TCS8 1911 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 ATRNL1Q5VV63 1379 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 MAST3O60307 1309 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 A0A1B0GUL7 405 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 TRIM75PA6NK02 468 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 PHF20L1A8MW92 1017 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 HMGCRP04035 888 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 TERF1P54274 439 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 TFCP2Q12800 502 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 SF3A1Q15459 793 aaKnown RBP8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 CAVIN4Q5BKX8 364 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 TREML2Q5T2D2 321 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 FASTKD5Q7L8L6 764 aaKnown RBP8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 ANKLE1Q8NAG6 615 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 COA7Q96BR5 231 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 ANAPC4Q9UJX5 808 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 ZHX1Q9UKY1 873 aaPredicted RBP8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 AFG3L2Q9Y4W6 797 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 CEP83Q9Y592 693 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 PTPRFP10586 1907 aa8.64□□□□□ -1.03
RPUSD3-212ENST00000466141 PDS5AQ29RF7 1337 aaKnown RBP8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 PHKA1P46020 1223 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 FOSBP53539 338 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 SH3BP5LQ7L8J4 393 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 TRIB2Q92519 343 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 MRIQ9BWK5 157 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 HMX1Q9NP08 348 aaPredicted RBP8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 PICK1Q9NRD5 415 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 RAPGEFL1Q9UHV5 662 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 PHIPQ8WWQ0 1821 aa8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 COL2A1P02458 1487 aaPredicted RBP8.63□□□□□ -1.03
RPUSD3-212ENST00000466141 EYSQ5T1H1 3165 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 EPB41L2O43491 1005 aaKnown RBP8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 PEX10O60683 326 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 PPFIA4O75335 1185 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 SURF6O75683 361 aaKnown RBP8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 NEFHP12036 1026 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 CAPN2P17655 700 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 PRDX5P30044 214 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 G3BP1Q13283 466 aaKnown RBP eCLIP8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 RASGRF1Q13972 1273 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 LRRC26Q2I0M4 334 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 RPAP2Q8IXW5 612 aaPredicted RBP8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 METTL14Q9HCE5 456 aaKnown RBP8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 GPR108Q9NPR9 543 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 JADE2Q9NQC1 790 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 USP40Q9NVE5 1235 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 GJD2Q9UKL4 321 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 OGDHLQ9ULD0 1010 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 AGTPBP1Q9UPW5 1226 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 EXOC6BQ9Y2D4 811 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 SLC45A1Q9Y2W3 748 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 DOCK1Q14185 1865 aa8.62□□□□□ -1.03
RPUSD3-212ENST00000466141 PLXNB2O15031 1838 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 SALL1Q9NSC2 1324 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 FAM196BA6NMK8 535 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 COL6A1P12109 1028 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 PRKAR2AP13861 404 aaKnown RBP8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 CYP2B6P20813 491 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 COL9A1P20849 921 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 TIMM10P62072 90 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 FAM110CQ1W6H9 321 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 UVSSAQ2YD98 709 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 TNNI3KQ59H18 835 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 ZFYVE27Q5T4F4 411 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 FAM109BQ6ICB4 259 aaPredicted RBP8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 MAFAQ8NHW3 353 aaPredicted RBP8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 XAGE2Q96GT9 111 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 CRBNQ96SW2 442 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 CDX2Q99626 313 aaPredicted RBP8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 AKAP2Q9Y2D5 859 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 FPGT-TNNI3KV9GXZ4 949 aa8.61□□□□□ -1.03
RPUSD3-212ENST00000466141 SIPA1L1O43166 1804 aa8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 DDTLA6NHG4 134 aaPredicted RBP8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 HMMRO75330 724 aa8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 MAP3K21Q5TCX8 1036 aa8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 ZNF697Q5TEC3 545 aa8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 GET4Q7L5D6 327 aaPredicted RBP8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 ERC1Q8IUD2 1116 aa8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 ZSCAN29Q8IWY8 852 aaPredicted RBP8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 TLR7Q9NYK1 1049 aaKnown RBP8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 DBNLQ9UJU6 430 aaKnown RBP8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 MUC3AQ02505 3323 aa8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 RFX7Q2KHR2 1363 aa8.6□□□□□ -1.03
RPUSD3-212ENST00000466141 TBC1D12O60347 775 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 CCND3P30281 292 aaPredicted RBP8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 MCAMP43121 646 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 RHBDL3P58872 404 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms