RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 PAGR1Q9BTK6 254 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
NPHP3-203ENST00000465756 FBXO40Q9UH90 709 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 TFAP4Q01664 338 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 KRT32Q14532 448 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 AKNAD1Q5T1N1 836 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 MCOLN1Q9GZU1 580 aa12.69□□□□□ -0.38
NPHP3-203ENST00000465756 CYP2D6P10635 497 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 TTC14Q96N46 770 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
NPHP3-203ENST00000465756 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 CCDC85CA6NKD9 419 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 TOP1P11387 765 aaKnown RBP12.68□□□□□ -0.38
NPHP3-203ENST00000465756 AKR1B1P15121 316 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 HERVK_113P62684 666 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 LACTBP83111 547 aaPredicted RBP12.68□□□□□ -0.38
NPHP3-203ENST00000465756 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
NPHP3-203ENST00000465756 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
NPHP3-203ENST00000465756 HSPD1P10809 573 aaKnown RBP12.67□□□□□ -0.38
NPHP3-203ENST00000465756 DEKP35659 375 aaKnown RBP12.67□□□□□ -0.38
NPHP3-203ENST00000465756 RGS2P41220 211 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 FGD1P98174 961 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 ABHD8Q96I13 439 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 CLIP2Q9UDT6 1046 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 SHCBP1Q8NEM2 672 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 TKFCQ3LXA3 575 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 DCAF4Q8WV16 495 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 MROH8Q9H579 483 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 MORF4L1Q9UBU8 362 aa12.67□□□□□ -0.38
NPHP3-203ENST00000465756 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
NPHP3-203ENST00000465756 SLC1A4P43007 532 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 MFSD14CQ5VZR4 134 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 SRRDQ9UH36 339 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 RASA1P20936 1047 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 NCOA7Q8NI08 942 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 FAM227BQ96M60 508 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 SLF1Q9BQI6 1058 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 A0A0D9SFI3 127 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 STRNO43815 780 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 PLS1Q14651 629 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 CATSPERGQ6ZRH7 1159 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
NPHP3-203ENST00000465756 BMP3P12645 472 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 VCAM1P19320 739 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 ANO2Q9NQ90 1003 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 FGAP02671 866 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 KCTD2Q14681 263 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.38
NPHP3-203ENST00000465756 DHX16O60231 1041 aaKnown RBP12.65□□□□□ -0.38
NPHP3-203ENST00000465756 CHMLP26374 656 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 GPATCH4Q5T3I0 446 aaKnown RBP12.65□□□□□ -0.38
NPHP3-203ENST00000465756 GPAT2Q6NUI2 795 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 CHMP4CQ96CF2 233 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 SEC62Q99442 399 aaKnown RBP12.65□□□□□ -0.38
NPHP3-203ENST00000465756 PTPN18Q99952 460 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 DNAJC18Q9H819 358 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 PTPN22Q9Y2R2 807 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
NPHP3-203ENST00000465756 BCRP11274 1271 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 SLC15A5A6NIM6 579 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 GNAQP50148 359 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 MTA3Q9BTC8 594 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 FOCADQ5VW36 1801 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
NPHP3-203ENST00000465756 CYP2C8P10632 490 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 DGKHQ86XP1 1220 aa12.64□□□□□ -0.39
NPHP3-203ENST00000465756 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
NPHP3-203ENST00000465756 EPB41L2O43491 1005 aaKnown RBP12.63□□□□□ -0.39
NPHP3-203ENST00000465756 ERVK-9P63128 1117 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 ERVK-24P63145 666 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 IRF5Q13568 498 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 LBX2Q6XYB7 198 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 CCDC84Q86UT8 332 aaPredicted RBP12.63□□□□□ -0.39
NPHP3-203ENST00000465756 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 PRDM1O75626 825 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 PSMA5P28066 241 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 DSG3P32926 999 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 KIF5BP33176 963 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 OAZ1P54368 228 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 COL13A1Q5TAT6 717 aaPredicted RBP12.63□□□□□ -0.39
NPHP3-203ENST00000465756 MKL1Q969V6 931 aa12.63□□□□□ -0.39
NPHP3-203ENST00000465756 EMILIN3Q9NT22 766 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms