RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 LAMB1P07942 1786 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 CNTNAP5Q8WYK1 1306 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 CASZ1Q86V15 1759 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 LRRC10BA6NIK2 292 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 PRDM1O75626 825 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 GYG1P46976 350 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 RBL2Q08999 1139 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 TAF3Q5VWG9 929 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 CTR9Q6PD62 1173 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 TMED8Q6PL24 325 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 FAM177A1Q8N128 213 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 UBXN6Q9BZV1 441 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 MRPL44Q9H9J2 332 aaKnown RBP14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 BSDC1Q9NW68 430 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 LOC102724428A0A0B4J2F2 783 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 MFAP3LO75121 409 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 SIK1P57059 783 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 SF3B3Q15393 1217 aaKnown RBP14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 FILIP1LQ4L180 1135 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 RASGRP2Q7LDG7 609 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 ZNF384Q8TF68 577 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 DESI2Q9BSY9 194 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 IQSEC3Q9UPP2 1182 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 PDS5AQ29RF7 1337 aaKnown RBP14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 SOWAHDA6NJG2 315 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 TUBB2AQ13885 445 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 ANKRD18AQ8IVF6 992 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 IQUBQ8NA54 791 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 TUBB2BQ9BVA1 445 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 LIMA1Q9UHB6 759 aaKnown RBP14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 DYNLL1P63167 89 aaKnown RBP14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 PTGDRQ13258 359 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 ITPK1Q13572 414 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 MTF1Q14872 753 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 ZNF174Q15697 407 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 CAVIN4Q5BKX8 364 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 KLHL10Q6JEL2 608 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 CLEC4GQ6UXB4 293 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 RAD9BQ6WBX8 426 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 CNGA4Q8IV77 575 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 ST7Q9NRC1 585 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 ZNF652Q9Y2D9 606 aa14.49□□□□□ -0.09
ARHGEF3-204ENST00000465659 XDHP47989 1333 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 CYP2D7A0A087X1C5 515 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 hCG_1642624A0A1W2PR95 340 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 JAKMIP3Q5VZ66 844 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 CC2D1AQ6P1N0 951 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 PDXDC2PQ6P474 469 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 SRBD1Q8N5C6 995 aaKnown RBP14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 ROBO1Q9Y6N7 1651 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 COL5A3P25940 1745 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 CASP1P29466 404 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 STX17P56962 302 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 GOLGA1Q92805 767 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 RWDD2AQ9UIY3 292 aa14.48□□□□□ -0.09
ARHGEF3-204ENST00000465659 MYH13Q9UKX3 1938 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 GTPBP6O43824 516 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 TBC1D8O95759 1140 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 SCG2P13521 617 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 SPAG1Q07617 926 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 KARSQ15046 597 aaKnown RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 NOM1Q5C9Z4 860 aaKnown RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 FBXO33Q7Z6M2 555 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 CTCFLQ8NI51 663 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 CCDC12Q8WUD4 166 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 USP17L12C9JPN9 530 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 USP17L21D6R901 530 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 GYPCP04921 128 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 PFKFB3Q16875 520 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 ARL6IP4Q66PJ3 421 aaKnown RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 NSUN4Q96CB9 384 aaKnown RBP14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 MINPP1Q9UNW1 487 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 KIAA1551Q9HCM1 1747 aa14.47□□□□□ -0.09
ARHGEF3-204ENST00000465659 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 KIF5CO60282 957 aa14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 TXLNAP40222 546 aa14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 TUBB4BP68371 445 aa14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 SMYD4Q8IYR2 804 aaPredicted RBP14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 THRAP3Q9Y2W1 955 aaKnown RBP14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 TAF1P21675 1872 aa14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 MAST2Q6P0Q8 1798 aa14.46□□□□□ -0.09
ARHGEF3-204ENST00000465659 ZBTB22O15209 634 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 CASP14P31944 242 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 NT5C2P49902 561 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 TRIM14Q14142 442 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 SBK1Q52WX2 424 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 TEX35Q5T0J7 233 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 TMTC1Q8IUR5 882 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 PARD6BQ9BYG5 372 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 TTF2Q9UNY4 1162 aaKnown RBP14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 CTNND2Q9UQB3 1225 aa14.46□□□□□ -0.1
ARHGEF3-204ENST00000465659 RGL2O15211 777 aa14.45□□□□□ -0.1
ARHGEF3-204ENST00000465659 KRT31Q15323 416 aa14.45□□□□□ -0.1
ARHGEF3-204ENST00000465659 IL17AQ16552 155 aa14.45□□□□□ -0.1
ARHGEF3-204ENST00000465659 ZNF658Q5TYW1 1059 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF3-204ENST00000465659 SRGAP1Q7Z6B7 1085 aa14.45□□□□□ -0.1
ARHGEF3-204ENST00000465659 MTRQ99707 1265 aa14.45□□□□□ -0.1
ARHGEF3-204ENST00000465659 DCP1AQ9NPI6 582 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF3-204ENST00000465659 ATP8A2Q9NTI2 1148 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms