RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 HSPD1P10809 573 aaKnown RBP11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 HAND2P61296 217 aa11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L2Q6R6M4 530 aa11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 C17orf99Q6UX52 265 aa11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 ASCC2Q9H1I8 757 aaPredicted RBP11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 IL25Q9H293 177 aa11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
CTNNB1-211ENST00000465552 CCDC85CA6NKD9 419 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 BCRP11274 1271 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 OSBPP22059 807 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 CTGFP29279 349 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 PABPC4Q13310 644 aaKnown RBP eCLIP11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 FAM47AQ5JRC9 791 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 CCDC17Q96LX7 622 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 ARHGEF10LQ9HCE6 1279 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
CTNNB1-211ENST00000465552 HIP1O00291 1037 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 EEF2P13639 858 aaKnown RBP11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 VCAM1P19320 739 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 USP14P54578 494 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 PDE4BQ07343 736 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 KIF22Q14807 665 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 SPICE1Q8N0Z3 855 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 PAGR1Q9BTK6 254 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 TANGO6Q9C0B7 1094 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 KIAA1683Q9H0B3 1180 aa11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 RPAP3Q9H6T3 665 aaPredicted RBP11.81□□□□□ -0.52
CTNNB1-211ENST00000465552 LCTP09848 1927 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 FGAP02671 866 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 SLC3A2P08195 630 aaKnown RBP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 PSMC4P43686 418 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 HERVK_113P62684 666 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 RRP12Q5JTH9 1297 aaKnown RBP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 FBXO46Q6PJ61 603 aaPredicted RBP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 ZNF444Q8N0Y2 327 aaPredicted RBP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 C12orf42Q96LP6 360 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 P2RX7Q99572 595 aaKnown RBP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 PTCH2Q9Y6C5 1203 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 ZNF236Q9UL36 1845 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 HTTP42858 3142 aa11.8□□□□□ -0.52
CTNNB1-211ENST00000465552 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 TSPY2A6NKD2 308 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 SIAH1Q8IUQ4 282 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 SH2D4AQ9H788 454 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 ZNF287Q9HBT7 754 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 TXNRD2Q9NNW7 524 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 ZMYM6O95789 1325 aa11.79□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 NMT2O60551 498 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 MYCP01106 439 aaPredicted RBP11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 CHMLP26374 656 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 TFAP4Q01664 338 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 ALX1Q15699 326 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 FAM110CQ1W6H9 321 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 NUP88Q99567 741 aaPredicted RBP11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 VCPKMTQ9H867 229 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 KANSL2Q9H9L4 492 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 ISY1Q9ULR0 285 aaKnown RBP11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 PTPN22Q9Y2R2 807 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 TMX2Q9Y320 296 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 NEDD4P46934 1319 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 MYPNQ86TC9 1320 aa11.78□□□□□ -0.52
CTNNB1-211ENST00000465552 BRCA2P51587 3418 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms