RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 KIAA1211Q6ZU35 1233 aa24.04■■□□□ 1.44
SKA3-205ENST00000465471 OSBPP22059 807 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 ATP2B2Q01814 1243 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 RRP12Q5JTH9 1297 aaKnown RBP24.03■■□□□ 1.44
SKA3-205ENST00000465471 PPP4R3BQ5MIZ7 849 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 CATSPERGQ6ZRH7 1159 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 ESR2Q92731 530 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 ANO2Q9NQ90 1003 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 TOMM22Q9NS69 142 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 CLIP2Q9UDT6 1046 aa24.03■■□□□ 1.44
SKA3-205ENST00000465471 A0A0G2JMZ2 1700 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L15C9J2P7 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L13C9JLJ4 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L11C9JVI0 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L18D6R9N7 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L22D6RA61 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L17D6RBQ6 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L19D6RCP7 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L20D6RJB6 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 NMT2O60551 498 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 SP3Q02447 781 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 USP17L24Q0WX57 530 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 RPAP3Q9H6T3 665 aaPredicted RBP24.02■■□□□ 1.44
SKA3-205ENST00000465471 GOPCQ9HD26 462 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 CPA4Q9UI42 421 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 TAF6LQ9Y6J9 622 aa24.02■■□□□ 1.44
SKA3-205ENST00000465471 WDR46O15213 610 aaKnown RBP24.01■■□□□ 1.43
SKA3-205ENST00000465471 IRX3P78415 501 aaPredicted RBP24.01■■□□□ 1.43
SKA3-205ENST00000465471 SMCR8Q8TEV9 937 aaPredicted RBP24.01■■□□□ 1.43
SKA3-205ENST00000465471 CNNM2Q9H8M5 875 aa24.01■■□□□ 1.43
SKA3-205ENST00000465471 ZSWIM8A7E2V4 1837 aa24■■□□□ 1.43
SKA3-205ENST00000465471 GCLCP48506 637 aaPredicted RBP24■■□□□ 1.43
SKA3-205ENST00000465471 HERVK_113P62684 666 aa24■■□□□ 1.43
SKA3-205ENST00000465471 CAP1Q01518 475 aa24■■□□□ 1.43
SKA3-205ENST00000465471 NECTIN1Q15223 517 aa24■■□□□ 1.43
SKA3-205ENST00000465471 COL13A1Q5TAT6 717 aaPredicted RBP24■■□□□ 1.43
SKA3-205ENST00000465471 POTEEQ6S8J3 1075 aa24■■□□□ 1.43
SKA3-205ENST00000465471 LBX2Q6XYB7 198 aa24■■□□□ 1.43
SKA3-205ENST00000465471 SPICE1Q8N0Z3 855 aa24■■□□□ 1.43
SKA3-205ENST00000465471 GMCL1P1Q8NEA9 526 aa24■■□□□ 1.43
SKA3-205ENST00000465471 P2RX7Q99572 595 aaKnown RBP24■■□□□ 1.43
SKA3-205ENST00000465471 KRT23Q9C075 422 aa24■■□□□ 1.43
SKA3-205ENST00000465471 B4E1Z4 1266 aa23.99■■□□□ 1.43
SKA3-205ENST00000465471 KDM4AO75164 1064 aa23.99■■□□□ 1.43
SKA3-205ENST00000465471 FAM110CQ1W6H9 321 aa23.99■■□□□ 1.43
SKA3-205ENST00000465471 RCSD1Q6JBY9 416 aa23.99■■□□□ 1.43
SKA3-205ENST00000465471 STOX1Q6ZVD7 989 aa23.99■■□□□ 1.43
SKA3-205ENST00000465471 F5H6K3 240 aa23.98■■□□□ 1.43
SKA3-205ENST00000465471 NDUFB10O96000 172 aa23.98■■□□□ 1.43
SKA3-205ENST00000465471 LACTBP83111 547 aaPredicted RBP23.98■■□□□ 1.43
SKA3-205ENST00000465471 KLRC3Q07444 240 aa23.98■■□□□ 1.43
SKA3-205ENST00000465471 LRRC47Q8N1G4 583 aaKnown RBP23.98■■□□□ 1.43
SKA3-205ENST00000465471 GTF3C2Q8WUA4 911 aaPredicted RBP23.98■■□□□ 1.43
SKA3-205ENST00000465471 ERO1AQ96HE7 468 aa23.98■■□□□ 1.43
SKA3-205ENST00000465471 MORF4L1Q9UBU8 362 aa23.98■■□□□ 1.43
SKA3-205ENST00000465471 STX8Q9UNK0 236 aa23.98■■□□□ 1.43
SKA3-205ENST00000465471 MGAMO43451 1857 aa23.98■■□□□ 1.43
SKA3-205ENST00000465471 SPDYE16A6NNV3 312 aaPredicted RBP23.97■■□□□ 1.43
SKA3-205ENST00000465471 E7EWF7 191 aa23.97■■□□□ 1.43
SKA3-205ENST00000465471 SLC27A2O14975 620 aa23.97■■□□□ 1.43
SKA3-205ENST00000465471 MYPNQ86TC9 1320 aa23.97■■□□□ 1.43
SKA3-205ENST00000465471 CD99L2Q8TCZ2 262 aa23.97■■□□□ 1.43
SKA3-205ENST00000465471 ZSWIM5Q9P217 1185 aa23.97■■□□□ 1.43
SKA3-205ENST00000465471 CREB3L3Q68CJ9 461 aa23.96■■□□□ 1.43
SKA3-205ENST00000465471 CTU1Q7Z7A3 348 aaKnown RBP23.96■■□□□ 1.43
SKA3-205ENST00000465471 ANKRD13CQ8N6S4 541 aa23.96■■□□□ 1.43
SKA3-205ENST00000465471 TTC14Q96N46 770 aa23.96■■□□□ 1.43
SKA3-205ENST00000465471 TANGO6Q9C0B7 1094 aa23.96■■□□□ 1.43
SKA3-205ENST00000465471 CTGFP29279 349 aa23.95■■□□□ 1.42
SKA3-205ENST00000465471 FAM83BQ5T0W9 1011 aa23.95■■□□□ 1.42
SKA3-205ENST00000465471 DGKHQ86XP1 1220 aa23.95■■□□□ 1.42
SKA3-205ENST00000465471 ANKS1AQ92625 1134 aa23.95■■□□□ 1.42
SKA3-205ENST00000465471 TMEM47Q9BQJ4 181 aa23.95■■□□□ 1.42
SKA3-205ENST00000465471 TXNRD2Q9NNW7 524 aa23.95■■□□□ 1.42
SKA3-205ENST00000465471 RBPJLQ9UBG7 517 aa23.95■■□□□ 1.42
SKA3-205ENST00000465471 CNMDO75829 334 aa23.94■■□□□ 1.42
SKA3-205ENST00000465471 TOP1P11387 765 aaKnown RBP23.94■■□□□ 1.42
SKA3-205ENST00000465471 COG2Q14746 738 aa23.94■■□□□ 1.42
SKA3-205ENST00000465471 CCDC178Q5BJE1 867 aa23.94■■□□□ 1.42
SKA3-205ENST00000465471 CYB5R4Q7L1T6 521 aa23.94■■□□□ 1.42
SKA3-205ENST00000465471 IQCA1Q86XH1 822 aa23.94■■□□□ 1.42
SKA3-205ENST00000465471 GMCL1Q96IK5 515 aa23.94■■□□□ 1.42
SKA3-205ENST00000465471 ZSCAN10Q96SZ4 725 aaPredicted RBP23.94■■□□□ 1.42
SKA3-205ENST00000465471 ARHGAP39Q9C0H5 1083 aa23.94■■□□□ 1.42
SKA3-205ENST00000465471 DSG3P32926 999 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 TRDNQ13061 729 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 SLFN13Q68D06 897 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 OTOP1Q7RTM1 612 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 MB21D2Q8IYB1 491 aaPredicted RBP23.93■■□□□ 1.42
SKA3-205ENST00000465471 NCOA7Q8NI08 942 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 NUP88Q99567 741 aaPredicted RBP23.93■■□□□ 1.42
SKA3-205ENST00000465471 ZKSCAN3Q9BRR0 538 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 ADAMTS5Q9UNA0 930 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 RABGAP1Q9Y3P9 1069 aa23.93■■□□□ 1.42
SKA3-205ENST00000465471 TNKSO95271 1327 aa23.92■■□□□ 1.42
SKA3-205ENST00000465471 COL11A1P12107 1806 aaPredicted RBP23.92■■□□□ 1.42
SKA3-205ENST00000465471 EPB41L2O43491 1005 aaKnown RBP23.92■■□□□ 1.42
SKA3-205ENST00000465471 FLOT1O75955 427 aa23.92■■□□□ 1.42
SKA3-205ENST00000465471 REC8O95072 547 aa23.92■■□□□ 1.42
SKA3-205ENST00000465471 ENAHQ8N8S7 591 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms