RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 CHST3Q7LGC8 479 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 PRRT2Q7Z6L0 340 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-223ENST00000465459 CLEC10AQ8IUN9 316 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-223ENST00000465459 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 CAPNS2Q96L46 248 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 C12orf42Q96LP6 360 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 KIF2CQ99661 725 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 TMEM47Q9BQJ4 181 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 AGXT2Q9BYV1 514 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
HLA-F-223ENST00000465459 MTMR2Q13614 643 aa17.25■□□□□ 0.35
HLA-F-223ENST00000465459 COL9A3Q14050 684 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-223ENST00000465459 RABEP1Q15276 862 aa17.25■□□□□ 0.35
HLA-F-223ENST00000465459 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-223ENST00000465459 SGMS1Q86VZ5 419 aa17.25■□□□□ 0.35
HLA-F-223ENST00000465459 PROCA1Q8NCQ7 364 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-223ENST00000465459 MS4A4AQ96JQ5 239 aa17.25■□□□□ 0.35
HLA-F-223ENST00000465459 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
HLA-F-223ENST00000465459 LY9Q9HBG7 655 aa17.25■□□□□ 0.35
HLA-F-223ENST00000465459 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
HLA-F-223ENST00000465459 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-223ENST00000465459 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
HLA-F-223ENST00000465459 FGD1P98174 961 aa17.24■□□□□ 0.35
HLA-F-223ENST00000465459 CYP4F22Q6NT55 531 aa17.24■□□□□ 0.35
HLA-F-223ENST00000465459 UPF3BQ9BZI7 483 aaKnown RBP17.24■□□□□ 0.35
HLA-F-223ENST00000465459 PDRG1Q9NUG6 133 aa17.24■□□□□ 0.35
HLA-F-223ENST00000465459 F5H6K3 240 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 CPA1P15085 419 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 MAP2K2P36507 400 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 HMGCS2P54868 508 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 KLRC3Q07444 240 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 ANKRD1Q15327 319 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 Q6ZUG5 572 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 GMCL1Q96IK5 515 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 EMILIN3Q9NT22 766 aa17.23■□□□□ 0.35
HLA-F-223ENST00000465459 WDR33Q9C0J8 1336 aaKnown RBP17.22■□□□□ 0.35
HLA-F-223ENST00000465459 MYH4Q9Y623 1939 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 CCL15-CCL14A0A0B4J2E2 113 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 CCDC69A6NI79 296 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 NEK4P51957 841 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 RCAN1P53805 252 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 EVCP57679 992 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 CCL15Q16663 113 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 CATIPQ7Z7H3 387 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 LRRC47Q8N1G4 583 aaKnown RBP17.22■□□□□ 0.35
HLA-F-223ENST00000465459 TCEANC2Q96MN5 208 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 MAP3K14Q99558 947 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
HLA-F-223ENST00000465459 SLC45A1Q9Y2W3 748 aa17.22■□□□□ 0.35
HLA-F-223ENST00000465459 WDR46O15213 610 aaKnown RBP17.21■□□□□ 0.35
HLA-F-223ENST00000465459 DDAH1O94760 285 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 NDUFB10O96000 172 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 CALM1P0DP23 149 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 CALM2P0DP24 149 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 CALM3P0DP25 149 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 SNHG28P0DPA3 235 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 TM4SF4P48230 202 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 VEGFBP49765 207 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 MKRN3Q13064 507 aaKnown RBP17.21■□□□□ 0.35
HLA-F-223ENST00000465459 PABPC4Q13310 644 aaKnown RBP eCLIP17.21■□□□□ 0.35
HLA-F-223ENST00000465459 MOGSQ13724 837 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 SYNE3Q6ZMZ3 975 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 NFXL1Q6ZNB6 911 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 BRI3BPQ8WY22 251 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 LRRC2Q9BYS8 371 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
HLA-F-223ENST00000465459 AGTPBP1Q9UPW5 1226 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 PTPRFP10586 1907 aa17.21■□□□□ 0.35
HLA-F-223ENST00000465459 VCAM1P19320 739 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
HLA-F-223ENST00000465459 HTRA3P83110 453 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
HLA-F-223ENST00000465459 TROAPQ12815 778 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 ZYXQ15942 572 aaKnown RBP17.2■□□□□ 0.34
HLA-F-223ENST00000465459 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 GADL1Q6ZQY3 521 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 ANKRD23Q86SG2 305 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 BRF1Q92994 677 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L15C9J2P7 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L13C9JLJ4 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L11C9JVI0 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L18D6R9N7 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L22D6RA61 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L17D6RBQ6 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L19D6RCP7 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L20D6RJB6 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 ST18O60284 1047 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 PDHBP11177 359 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 BMP3P12645 472 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 SLC1A4P43007 532 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 USP17L24Q0WX57 530 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 GRM1Q13255 1194 aa17.19■□□□□ 0.34
HLA-F-223ENST00000465459 TOB2Q14106 344 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms