RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 SENP2Q9HC62 589 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 PRDM10Q9NQV6 1147 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 GPRC5DQ9NZD1 345 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 KCNMB2Q9Y691 235 aa7.42□□□□□ -1.22
SSBP1-204ENST00000465167 WDR33Q9C0J8 1336 aaKnown RBP7.42□□□□□ -1.22
SSBP1-204ENST00000465167 LRRC37AA6NMS7 1700 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 LTBP1Q14766 1721 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 RAD17O75943 681 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 THBS1P07996 1170 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 MAPK8P45983 427 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 GMPSP49915 693 aaPredicted RBP7.41□□□□□ -1.22
SSBP1-204ENST00000465167 GNAI1P63096 354 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 KRT24Q2M2I5 525 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 CCDC30Q5VVM6 783 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 XKR5Q6UX68 686 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 LRP10Q7Z4F1 713 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
SSBP1-204ENST00000465167 MRRFQ96E11 262 aaKnown RBP7.41□□□□□ -1.22
SSBP1-204ENST00000465167 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
SSBP1-204ENST00000465167 ZNF408Q9H9D4 720 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 IFT57Q9NWB7 429 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 KIAA1522Q9P206 1035 aaPredicted RBP7.41□□□□□ -1.22
SSBP1-204ENST00000465167 NSFL1CQ9UNZ2 370 aaKnown RBP7.41□□□□□ -1.22
SSBP1-204ENST00000465167 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 COL4A5P29400 1685 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 TAF1P21675 1872 aa7.41□□□□□ -1.22
SSBP1-204ENST00000465167 IRS4O14654 1257 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-204ENST00000465167 CELF2O95319 508 aaKnown RBP7.4□□□□□ -1.22
SSBP1-204ENST00000465167 EPB42P16452 691 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 LBX1P52954 281 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 CXCL9Q07325 125 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 NEXNQ0ZGT2 675 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 TRIP4Q15650 581 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-204ENST00000465167 CCDC152Q4G0S7 254 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 RIPOR1Q6ZS17 1223 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 ZBTB38Q8NAP3 1195 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-204ENST00000465167 FAM89AQ96GI7 184 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 CAPNS2Q96L46 248 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 TRIM47Q96LD4 638 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 STK31Q9BXU1 1019 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
SSBP1-204ENST00000465167 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 MBIPQ9NS73 344 aa7.4□□□□□ -1.22
SSBP1-204ENST00000465167 FNDC3AQ9Y2H6 1198 aaKnown RBP7.4□□□□□ -1.22
SSBP1-204ENST00000465167 MYH3P11055 1940 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 TRAF5O00463 557 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 APAF1O14727 1248 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 RPS12P25398 132 aaKnown RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 UBAP2LQ14157 1087 aaKnown RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 SF3B3Q15393 1217 aaKnown RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 ENOX2Q16206 610 aaKnown RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 CYP4F22Q6NT55 531 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 CDC37L1Q7L3B6 337 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 CCDC155Q8N6L0 562 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 CCDC191Q8NCU4 936 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 GPR101Q96P66 508 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 MYD88Q99836 296 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 ISCA1Q9BUE6 129 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 PRKRIP1Q9H875 184 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 DBNDD1Q9H9R9 158 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 C11orf16Q9NQ32 467 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 CWC25Q9NXE8 425 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 CNOT7Q9UIV1 285 aaKnown RBP7.39□□□□□ -1.23
SSBP1-204ENST00000465167 GGA1Q9UJY5 639 aa7.39□□□□□ -1.23
SSBP1-204ENST00000465167 CEP350Q5VT06 3117 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 THSD7BQ9C0I4 1608 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 H7C1W4 665 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 ELL2O00472 640 aaPredicted RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 CA12O43570 354 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 ECE2O60344 883 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 PDE8AO60658 829 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 UFL1O94874 794 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 LDHBP07195 334 aaKnown RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 MAP2K2P36507 400 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 RPS8P62241 208 aaKnown RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 FGD1P98174 961 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 ORC1Q13415 861 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 DBN1Q16643 649 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 PDE12Q6L8Q7 609 aaKnown RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 FIGNL1Q6PIW4 674 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 ANKRD18AQ8IVF6 992 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 DPF2Q92785 391 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 DCPSQ96C86 337 aaKnown RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 CSRNP1Q96S65 589 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 CDC5LQ99459 802 aaKnown RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 NUCKS1Q9H1E3 243 aaKnown RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 GMPR2Q9P2T1 348 aaKnown RBP7.38□□□□□ -1.23
SSBP1-204ENST00000465167 PCDHGC4Q9Y5F7 938 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 SPEF2Q9C093 1822 aa7.38□□□□□ -1.23
SSBP1-204ENST00000465167 PNMA6FA0A0J9YX94 578 aa7.37□□□□□ -1.23
SSBP1-204ENST00000465167 PSMD14O00487 310 aa7.37□□□□□ -1.23
SSBP1-204ENST00000465167 EIF1AYO14602 144 aaKnown RBP7.37□□□□□ -1.23
SSBP1-204ENST00000465167 EFSO43281 561 aa7.37□□□□□ -1.23
SSBP1-204ENST00000465167 XYLBO75191 536 aa7.37□□□□□ -1.23
SSBP1-204ENST00000465167 PRPF40AO75400 957 aaKnown RBP7.37□□□□□ -1.23
SSBP1-204ENST00000465167 EGFRP00533 1210 aa7.37□□□□□ -1.23
SSBP1-204ENST00000465167 HSPA8P11142 646 aaKnown RBP7.37□□□□□ -1.23
SSBP1-204ENST00000465167 GPSM2P81274 684 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms