RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 SLC6A17Q9H1V8 727 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 REV1Q9UBZ9 1251 aa5.57□□□□□ -1.52
GARNL3-213ENST00000464616 FITM1A5D6W6 292 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 NPIPB6E9PJ23 425 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 ZSCAN22P10073 491 aaPredicted RBP5.56□□□□□ -1.52
GARNL3-213ENST00000464616 ERCC3P19447 782 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 CFPP27918 469 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 PDE6BP35913 854 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 CWF19L2Q2TBE0 894 aaKnown RBP5.56□□□□□ -1.52
GARNL3-213ENST00000464616 ATG14Q6ZNE5 492 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 SLFN12Q8IYM2 578 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 KREMEN1Q96MU8 473 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 ASPNQ9BXN1 380 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 GPR160Q9UJ42 338 aa5.56□□□□□ -1.52
GARNL3-213ENST00000464616 LRRN2O75325 713 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 HTR3BO95264 441 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 RAG1P15918 1043 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 TRHRP34981 398 aaPredicted RBP5.55□□□□□ -1.52
GARNL3-213ENST00000464616 CHRNEQ04844 493 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 MPP2Q14168 576 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 KCNA10Q16322 511 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 BAHD1Q8TBE0 780 aaPredicted RBP5.55□□□□□ -1.52
GARNL3-213ENST00000464616 KIF2CQ99661 725 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 RSRP1Q9BUV0 290 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 C19orf44Q9H6X5 657 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 ZMYM5Q9UJ78 669 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 PCDHA11Q9Y5I1 949 aa5.55□□□□□ -1.52
GARNL3-213ENST00000464616 FAM221AA4D161 298 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 CHURC1-FNTBB4DL54 471 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 TLR3O15455 904 aaKnown RBP5.54□□□□□ -1.52
GARNL3-213ENST00000464616 CTSHP09668 335 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 RNF4P78317 190 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 SLC14A2Q15849 920 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 CCDC27Q2M243 656 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 SPOCD1Q6ZMY3 1216 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 ZNF605Q86T29 641 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 PPP1R13LQ8WUF5 828 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 RNF32Q9H0A6 362 aa5.54□□□□□ -1.52
GARNL3-213ENST00000464616 CWC22Q9HCG8 908 aaKnown RBP5.54□□□□□ -1.52
GARNL3-213ENST00000464616 ETV2O00321 342 aaPredicted RBP5.53□□□□□ -1.52
GARNL3-213ENST00000464616 NUAK1O60285 661 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 ZGLP1P0C6A0 271 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 SRFP11831 508 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 RPL10P27635 214 aaKnown RBP5.53□□□□□ -1.52
GARNL3-213ENST00000464616 GAB4Q2WGN9 574 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 REC114Q7Z4M0 266 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 SIAH1Q8IUQ4 282 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 ANKS4BQ8N8V4 417 aa5.53□□□□□ -1.52
GARNL3-213ENST00000464616 ZBTB7CA1YPR0 619 aa5.52□□□□□ -1.53
GARNL3-213ENST00000464616 GLDCP23378 1020 aa5.52□□□□□ -1.53
GARNL3-213ENST00000464616 NMIQ13287 307 aaPredicted RBP5.52□□□□□ -1.53
GARNL3-213ENST00000464616 SNX17Q15036 470 aa5.52□□□□□ -1.53
GARNL3-213ENST00000464616 ZNF326Q5BKZ1 582 aaKnown RBP5.52□□□□□ -1.53
GARNL3-213ENST00000464616 ARSHQ5FYA8 562 aa5.52□□□□□ -1.53
GARNL3-213ENST00000464616 IRF2BP1Q8IU81 584 aa5.52□□□□□ -1.53
GARNL3-213ENST00000464616 RHOVQ96L33 236 aa5.52□□□□□ -1.53
GARNL3-213ENST00000464616 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.52□□□□□ -1.53
GARNL3-213ENST00000464616 KCNK12Q9HB15 430 aa5.52□□□□□ -1.53
GARNL3-213ENST00000464616 SMG5Q9UPR3 1016 aaKnown RBP5.52□□□□□ -1.53
GARNL3-213ENST00000464616 SUPT16HQ9Y5B9 1047 aaKnown RBP5.52□□□□□ -1.53
GARNL3-213ENST00000464616 PRR36Q9H6K5 1346 aa5.51□□□□□ -1.53
GARNL3-213ENST00000464616 MCM4P33991 863 aa5.51□□□□□ -1.53
GARNL3-213ENST00000464616 PCBP3P57721 371 aaKnown RBP5.51□□□□□ -1.53
GARNL3-213ENST00000464616 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
GARNL3-213ENST00000464616 WAPLQ7Z5K2 1190 aa5.51□□□□□ -1.53
GARNL3-213ENST00000464616 ENOX1Q8TC92 643 aaKnown RBP5.51□□□□□ -1.53
GARNL3-213ENST00000464616 INTS4Q96HW7 963 aaKnown RBP5.51□□□□□ -1.53
GARNL3-213ENST00000464616 KBTBD4Q9NVX7 518 aa5.51□□□□□ -1.53
GARNL3-213ENST00000464616 ROBO2Q9HCK4 1378 aa5.51□□□□□ -1.53
GARNL3-213ENST00000464616 RBM47A0AV96 593 aaKnown RBP5.5□□□□□ -1.53
GARNL3-213ENST00000464616 RBAK-RBAKDNI3L0D1 243 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 RGS13O14921 159 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 EIF4A3P38919 411 aaKnown RBP5.5□□□□□ -1.53
GARNL3-213ENST00000464616 RAD51AP2Q09MP3 1159 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 NR0B2Q15466 257 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 RNF111Q6ZNA4 994 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 FAM196AQ6ZSG2 479 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 FBXO33Q7Z6M2 555 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 SIRT2Q8IXJ6 389 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 FBXO27Q8NI29 283 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 POLR3KQ9Y2Y1 108 aaPredicted RBP5.5□□□□□ -1.53
GARNL3-213ENST00000464616 PCDHB14Q9Y5E9 798 aa5.5□□□□□ -1.53
GARNL3-213ENST00000464616 OR14I1A6ND48 311 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 RFXAPO00287 272 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 MED14OSP0DP75 135 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 ADGRF1Q5T601 910 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 HS2ST1Q7LGA3 356 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 BCL2L13Q9BXK5 485 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 GZF1Q9H116 711 aaPredicted RBP5.49□□□□□ -1.53
GARNL3-213ENST00000464616 IRF2BPLQ9H1B7 796 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 BRMS1Q9HCU9 246 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 GMIPQ9P107 970 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 GGT7Q9UJ14 662 aa5.49□□□□□ -1.53
GARNL3-213ENST00000464616 CNOT6Q9ULM6 557 aaKnown RBP5.49□□□□□ -1.53
GARNL3-213ENST00000464616 YBX2Q9Y2T7 364 aaKnown RBP5.49□□□□□ -1.53
GARNL3-213ENST00000464616 SHISA3A0PJX4 238 aa5.48□□□□□ -1.53
GARNL3-213ENST00000464616 SLC22A31A6NKX4 558 aa5.48□□□□□ -1.53
GARNL3-213ENST00000464616 FKTNO75072 461 aa5.48□□□□□ -1.53
GARNL3-213ENST00000464616 SEMA7AO75326 666 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms