RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 KLHL6Q8WZ60 621 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 EPN3Q9H201 632 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 HMX2A2RU54 273 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 FAM221BA6H8Z2 402 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 C9IYK1 514 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 GSC2O15499 205 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 SMARCA5O60264 1052 aaPredicted RBP5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 SUSD5O60279 629 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 EOMESO95936 686 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 ZNF143P52747 638 aaPredicted RBP5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 CYP27C1Q4G0S4 372 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 NBPF12Q5TAG4 269 aaPredicted RBP5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 HEATR6Q6AI08 1181 aaKnown RBP5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 MRM1Q6IN84 353 aaKnown RBP5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 RIN3Q8TB24 985 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 ZNF669Q96BR6 464 aaPredicted RBP5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 ZNF512BQ96KM6 892 aaPredicted RBP5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 HAUS7Q99871 368 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 FAM86C1Q9NVL1 165 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 GTF2IRD1Q9UHL9 959 aa5.48□□□□□ -1.53
HMGXB4-205ENST00000464480 TLDC2A0PJX2 215 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 ANKRD34BA5PLL1 514 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 AGRPO00253 132 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 LEFTY1O75610 366 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 TP53P04637 393 aaPredicted RBP5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 TCEAL1Q15170 157 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 SFRP5Q5T4F7 317 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 RNF43Q68DV7 783 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 OGFOD3Q6PK18 319 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 MFSD14AQ96MC6 490 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 FBXL18Q96ME1 805 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 METTL22Q9BUU2 404 aaPredicted RBP5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 GBP3Q9H0R5 595 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 TPSG1Q9NRR2 321 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 KCNH3Q9ULD8 1083 aa5.47□□□□□ -1.53
HMGXB4-205ENST00000464480 IQCA1LA6NCM1 817 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 EPHX1P07099 455 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 CANXP27824 592 aaKnown RBP5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 KIR3DL1P43629 444 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 NFIAQ12857 509 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 CPSF6Q16630 551 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 SLC10A6Q3KNW5 377 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 DUSP27Q5VZP5 1158 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 DCAF15Q66K64 600 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 ARHGAP27Q6ZUM4 889 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 C22orf34Q6ZV56 151 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 JAZF1Q86VZ6 243 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 C7orf61Q8IZ16 206 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 FBXL6Q8N531 539 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 GATA6Q92908 595 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 VWCEQ96DN2 955 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 DBNDD2Q9BQY9 259 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 SEMA6BQ9H3T3 888 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 TBX22Q9Y458 520 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 PCDHB12Q9Y5F1 795 aa5.46□□□□□ -1.54
HMGXB4-205ENST00000464480 GNAT3A8MTJ3 354 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 IGF2BP3O00425 579 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 CBFA2T2O43439 604 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 H2AFB1P0C5Y9 115 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 H2AFB2P0C5Z0 115 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 ITGA4P13612 1032 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 ADMP35318 185 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 SSRP1Q08945 709 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 AUHQ13825 339 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 SV2CQ496J9 727 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 ANKRD39Q53RE8 183 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 ZNF765Q7L2R6 523 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 LRRC47Q8N1G4 583 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 DNAJC7Q99615 494 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 APBA2Q99767 749 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 KLHL25Q9H0H3 589 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 FBXL21Q9UKT6 434 aa5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 MRPL42Q9Y6G3 142 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-205ENST00000464480 FAM170BA6NMN3 283 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 PPM1BO75688 479 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 CBX7O95931 251 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 F13BP05160 661 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 ZNF865P0CJ78 1059 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 CD247P20963 164 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 NBPF9Q3BBW0 867 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 SDE2Q6IQ49 451 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 ADAT2Q7Z6V5 191 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 MFSD4AQ8N468 514 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 CRACR2BQ8N4Y2 399 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 PPP1R14AQ96A00 147 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 OSBPL1AQ9BXW6 950 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 ASCC2Q9H1I8 757 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 GP6Q9HCN6 339 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 ATG3Q9NT62 314 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 PRR13Q9NZ81 148 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 WHRNQ9P202 907 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 LRP2BPQ9P2M1 347 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 PFDN2Q9UHV9 154 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 ZMYM5Q9UJ78 669 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 SUGT1Q9Y2Z0 365 aa5.44□□□□□ -1.54
HMGXB4-205ENST00000464480 KDM2BQ8NHM5 1336 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms