RNA–Protein interactions for RNA: ENST00000464018.5

SEMA6C-205, Transcript of semaphorin 6C, humanhuman

TSL 2

Gene SEMA6C, Length 485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-205ENST00000464018 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
SEMA6C-205ENST00000464018 SYNPO2Q9UMS6 1093 aa16.64■□□□□ 0.25
SEMA6C-205ENST00000464018 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
SEMA6C-205ENST00000464018 PDHXO00330 501 aa16.63■□□□□ 0.25
SEMA6C-205ENST00000464018 TRPA1O75762 1119 aa16.63■□□□□ 0.25
SEMA6C-205ENST00000464018 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
SEMA6C-205ENST00000464018 CCDC178Q5BJE1 867 aa16.63■□□□□ 0.25
SEMA6C-205ENST00000464018 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
SEMA6C-205ENST00000464018 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
SEMA6C-205ENST00000464018 SAGE1Q9NXZ1 904 aa16.63■□□□□ 0.25
SEMA6C-205ENST00000464018 F5H6K3 240 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 CA12O43570 354 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 KLRC3Q07444 240 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 IQCA1Q86XH1 822 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 ZSCAN10Q96SZ4 725 aaPredicted RBP16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 BEGAINQ9BUH8 593 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 R3HDMLQ9H3Y0 253 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 SNX14Q9Y5W7 946 aa16.62■□□□□ 0.25
SEMA6C-205ENST00000464018 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 ANTXR2P58335 489 aa16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 COL9A3Q14050 684 aaPredicted RBP16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 KRT32Q14532 448 aa16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 SEC23AQ15436 765 aa16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 CATSPERGQ6ZRH7 1159 aa16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 LPAR1Q92633 364 aa16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
SEMA6C-205ENST00000464018 RLFQ13129 1914 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 VCAM1P19320 739 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 TAF1CQ15572 869 aaPredicted RBP16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 ADCK5Q3MIX3 580 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 GMCL1P1Q8NEA9 526 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 NEK1Q96PY6 1258 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 ZFYVE28Q9HCC9 887 aa16.6■□□□□ 0.25
SEMA6C-205ENST00000464018 NDUFB10O96000 172 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 OSBPP22059 807 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 MCM5P33992 734 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 CRHR2Q13324 411 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 SLFN13Q68D06 897 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 P2RX7Q99572 595 aaKnown RBP16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 MTA3Q9BTC8 594 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 ASCC2Q9H1I8 757 aaPredicted RBP16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 RPAP3Q9H6T3 665 aaPredicted RBP16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 PARP14Q460N5 1801 aa16.59■□□□□ 0.25
SEMA6C-205ENST00000464018 WDR46O15213 610 aaKnown RBP16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 FOXN1O15353 648 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 TLR2O60603 784 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 CYP2C8P10632 490 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 MCCP23508 829 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 TNS4Q8IZW8 715 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 TNKSO95271 1327 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 ADGRA2Q96PE1 1338 aa16.58■□□□□ 0.24
SEMA6C-205ENST00000464018 CASP8AP2Q9UKL3 1982 aa16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 IFIT3O14879 490 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 PRC1O43663 620 aa16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 C17orf99Q6UX52 265 aa16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 DHX32Q7L7V1 743 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 PARK7Q99497 189 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-205ENST00000464018 WDR19Q8NEZ3 1342 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 HMGB1P09429 215 aaKnown RBP16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 COG2Q14746 738 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 FAM83BQ5T0W9 1011 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 POTEEQ6S8J3 1075 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 IL17RAQ96F46 866 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 NUP88Q99567 741 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 SENP2Q9HC62 589 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 HOXC10Q9NYD6 342 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
SEMA6C-205ENST00000464018 GPR25O00155 361 aa16.55■□□□□ 0.24
SEMA6C-205ENST00000464018 RAD21O60216 631 aa16.55■□□□□ 0.24
SEMA6C-205ENST00000464018 SNHG28P0DPA3 235 aa16.55■□□□□ 0.24
SEMA6C-205ENST00000464018 HSPA8P11142 646 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms