RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 CYB5R4Q7L1T6 521 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 KCNB2Q92953 911 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 ZKSCAN3Q9BRR0 538 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 VCPKMTQ9H867 229 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 CNNM2Q9H8M5 875 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 SLC45A1Q9Y2W3 748 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 CASP8AP2Q9UKL3 1982 aa22.36■■□□□ 1.17
LMNB1-204ENST00000463908 HOXA7P31268 230 aaPredicted RBP22.35■■□□□ 1.17
LMNB1-204ENST00000463908 CRHR2Q13324 411 aa22.35■■□□□ 1.17
LMNB1-204ENST00000463908 SEC24BO95487 1268 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 CYP2C8P10632 490 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 VCAM1P19320 739 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 HSPA4P34932 840 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 NT5C2P49902 561 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 TAF1CQ15572 869 aaPredicted RBP22.34■■□□□ 1.17
LMNB1-204ENST00000463908 TSGA10IPQ3SY00 556 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 SPICE1Q8N0Z3 855 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 SH2D4AQ9H788 454 aa22.34■■□□□ 1.17
LMNB1-204ENST00000463908 F5H6K3 240 aa22.33■■□□□ 1.17
LMNB1-204ENST00000463908 KLRC3Q07444 240 aa22.33■■□□□ 1.17
LMNB1-204ENST00000463908 C8orf34Q49A92 452 aa22.33■■□□□ 1.17
LMNB1-204ENST00000463908 LRRC47Q8N1G4 583 aaKnown RBP22.33■■□□□ 1.17
LMNB1-204ENST00000463908 NCOA7Q8NI08 942 aa22.33■■□□□ 1.17
LMNB1-204ENST00000463908 TTC14Q96N46 770 aa22.33■■□□□ 1.17
LMNB1-204ENST00000463908 STX8Q9UNK0 236 aa22.33■■□□□ 1.17
LMNB1-204ENST00000463908 LOC285556D6RIA3 1793 aa22.33■■□□□ 1.16
LMNB1-204ENST00000463908 EPB41L2O43491 1005 aaKnown RBP22.32■■□□□ 1.16
LMNB1-204ENST00000463908 TRDNQ13061 729 aa22.32■■□□□ 1.16
LMNB1-204ENST00000463908 RNF20Q5VTR2 975 aa22.32■■□□□ 1.16
LMNB1-204ENST00000463908 CATSPERGQ6ZRH7 1159 aa22.32■■□□□ 1.16
LMNB1-204ENST00000463908 MB21D2Q8IYB1 491 aaPredicted RBP22.32■■□□□ 1.16
LMNB1-204ENST00000463908 ANKS1AQ92625 1134 aa22.32■■□□□ 1.16
LMNB1-204ENST00000463908 LPAR1Q92633 364 aa22.32■■□□□ 1.16
LMNB1-204ENST00000463908 ZSCAN10Q96SZ4 725 aaPredicted RBP22.32■■□□□ 1.16
LMNB1-204ENST00000463908 P2RX7Q99572 595 aaKnown RBP22.32■■□□□ 1.16
LMNB1-204ENST00000463908 TMEM47Q9BQJ4 181 aa22.32■■□□□ 1.16
LMNB1-204ENST00000463908 ASCC2Q9H1I8 757 aaPredicted RBP22.32■■□□□ 1.16
LMNB1-204ENST00000463908 ZFYVE28Q9HCC9 887 aa22.32■■□□□ 1.16
LMNB1-204ENST00000463908 ADGRA2Q96PE1 1338 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 NDUFB10O96000 172 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 ANTXR2P58335 489 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 ADCK5Q3MIX3 580 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 PPP4R3BQ5MIZ7 849 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 POTEEQ6S8J3 1075 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 CHST3Q7LGC8 479 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 DGKHQ86XP1 1220 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 RPAP3Q9H6T3 665 aaPredicted RBP22.31■■□□□ 1.16
LMNB1-204ENST00000463908 GOPCQ9HD26 462 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 SYNPO2Q9UMS6 1093 aa22.31■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L15C9J2P7 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L13C9JLJ4 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L11C9JVI0 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L18D6R9N7 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L22D6RA61 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L17D6RBQ6 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L19D6RCP7 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L20D6RJB6 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 TLR2O60603 784 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 OSBPP22059 807 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 USP17L24Q0WX57 530 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 PABPC4Q13310 644 aaKnown RBP eCLIP22.3■■□□□ 1.16
LMNB1-204ENST00000463908 IQCA1Q86XH1 822 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 GMCL1P1Q8NEA9 526 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 SNX14Q9Y5W7 946 aa22.3■■□□□ 1.16
LMNB1-204ENST00000463908 GPR25O00155 361 aa22.29■■□□□ 1.16
LMNB1-204ENST00000463908 TOP1P11387 765 aaKnown RBP22.29■■□□□ 1.16
LMNB1-204ENST00000463908 SEC23AQ15436 765 aa22.29■■□□□ 1.16
LMNB1-204ENST00000463908 C17orf99Q6UX52 265 aa22.29■■□□□ 1.16
LMNB1-204ENST00000463908 RALYLQ86SE5 291 aaKnown RBP22.29■■□□□ 1.16
LMNB1-204ENST00000463908 ENAHQ8N8S7 591 aaPredicted RBP22.29■■□□□ 1.16
LMNB1-204ENST00000463908 PARK7Q99497 189 aaKnown RBP22.29■■□□□ 1.16
LMNB1-204ENST00000463908 NUP88Q99567 741 aaPredicted RBP22.29■■□□□ 1.16
LMNB1-204ENST00000463908 WDR46O15213 610 aaKnown RBP22.28■■□□□ 1.16
LMNB1-204ENST00000463908 RAD21O60216 631 aa22.28■■□□□ 1.16
LMNB1-204ENST00000463908 CCDC178Q5BJE1 867 aa22.28■■□□□ 1.16
LMNB1-204ENST00000463908 SLFN13Q68D06 897 aa22.28■■□□□ 1.16
LMNB1-204ENST00000463908 IGDCC4Q8TDY8 1250 aa22.28■■□□□ 1.16
LMNB1-204ENST00000463908 CPA4Q9UI42 421 aa22.28■■□□□ 1.16
LMNB1-204ENST00000463908 TNKSO95271 1327 aa22.28■■□□□ 1.16
LMNB1-204ENST00000463908 ZKSCAN1P17029 563 aaPredicted RBP22.27■■□□□ 1.16
LMNB1-204ENST00000463908 NOM1Q5C9Z4 860 aaKnown RBP22.27■■□□□ 1.16
LMNB1-204ENST00000463908 FAM83BQ5T0W9 1011 aa22.27■■□□□ 1.16
LMNB1-204ENST00000463908 RASGRP2Q7LDG7 609 aa22.27■■□□□ 1.16
LMNB1-204ENST00000463908 CHMP4CQ96CF2 233 aa22.27■■□□□ 1.16
LMNB1-204ENST00000463908 NEK1Q96PY6 1258 aa22.27■■□□□ 1.16
LMNB1-204ENST00000463908 SENP2Q9HC62 589 aa22.27■■□□□ 1.16
LMNB1-204ENST00000463908 PNMA3Q9UL41 463 aa22.27■■□□□ 1.16
LMNB1-204ENST00000463908 PEX10O60683 326 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 SLC34A2O95436 690 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 BCRP11274 1271 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 MCCP23508 829 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 HERVK_113P62684 666 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 IRX3P78415 501 aaPredicted RBP22.26■■□□□ 1.15
LMNB1-204ENST00000463908 EXOSC10Q01780 885 aaKnown RBP22.26■■□□□ 1.15
LMNB1-204ENST00000463908 COG2Q14746 738 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 UBAC1Q9BSL1 405 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 GPHNQ9NQX3 736 aaPredicted RBP22.26■■□□□ 1.15
LMNB1-204ENST00000463908 FBXO28Q9NVF7 368 aa22.26■■□□□ 1.15
LMNB1-204ENST00000463908 IFIT3O14879 490 aaKnown RBP22.25■■□□□ 1.15
LMNB1-204ENST00000463908 PRC1O43663 620 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms