RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SREBF2Q12772 1141 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 NOL9Q5SY16 702 aaKnown RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 FAM173BQ6P4H8 233 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 MAPKAPK5Q8IW41 473 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 FAM200AQ8TCP9 573 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 OPTNQ96CV9 577 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 PGBD1Q96JS3 809 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 RNF186Q9NXI6 227 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 SAGE1Q9NXZ1 904 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 HERC5Q9UII4 1024 aaKnown RBP11.49□□□□□ -0.57
PTPRD-207ENST00000463477 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 FLT1P17948 1338 aa11.49□□□□□ -0.57
PTPRD-207ENST00000463477 CTAGE5O15320 804 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 PRC1O43663 620 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
PTPRD-207ENST00000463477 USP5P45974 858 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 PPATQ06203 517 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
PTPRD-207ENST00000463477 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
PTPRD-207ENST00000463477 RALYLQ86SE5 291 aaKnown RBP11.48□□□□□ -0.57
PTPRD-207ENST00000463477 DDX11Q96FC9 970 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 MS4A4AQ96JQ5 239 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 CRNKL1Q9BZJ0 848 aaKnown RBP11.48□□□□□ -0.57
PTPRD-207ENST00000463477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.48□□□□□ -0.57
PTPRD-207ENST00000463477 PRDM10Q9NQV6 1147 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
PTPRD-207ENST00000463477 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
PTPRD-207ENST00000463477 MAST2Q6P0Q8 1798 aa11.47□□□□□ -0.57
PTPRD-207ENST00000463477 DTNBO60941 627 aa11.47□□□□□ -0.57
PTPRD-207ENST00000463477 TPM3P06753 285 aa11.47□□□□□ -0.57
PTPRD-207ENST00000463477 HSPA8P11142 646 aaKnown RBP11.47□□□□□ -0.57
PTPRD-207ENST00000463477 ANTXR2P58335 489 aa11.47□□□□□ -0.57
PTPRD-207ENST00000463477 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
PTPRD-207ENST00000463477 TNMDQ9H2S6 317 aa11.47□□□□□ -0.57
PTPRD-207ENST00000463477 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
PTPRD-207ENST00000463477 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
PTPRD-207ENST00000463477 IRF6O14896 467 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 TRPA1O75762 1119 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 ADCY5O95622 1261 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 ALDH1A1P00352 501 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 SLURP2P0DP57 97 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 FDPSP14324 419 aaKnown RBP11.46□□□□□ -0.57
PTPRD-207ENST00000463477 GTF2A2P52657 109 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 LBX1P52954 281 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 TYRO3Q06418 890 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 TRDNQ13061 729 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 PPIL2Q13356 520 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 SCYL3Q8IZE3 742 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 TMEM87BQ96K49 555 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 MTA3Q9BTC8 594 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 HPS5Q9UPZ3 1129 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 NID2Q14112 1375 aa11.46□□□□□ -0.57
PTPRD-207ENST00000463477 HLA-DOAP06340 250 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 CCT2P78371 535 aaKnown RBP11.46□□□□□ -0.58
PTPRD-207ENST00000463477 OTUD7BQ6GQQ9 843 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 BRAPQ7Z569 592 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 IFNL1Q8IU54 200 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 LCORLQ8N3X6 602 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 STRBPQ96SI9 672 aaKnown RBP11.46□□□□□ -0.58
PTPRD-207ENST00000463477 CFHR5Q9BXR6 569 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 NBPF3Q9H094 633 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 ARMT1Q9H993 441 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 NCOA5Q9HCD5 579 aaKnown RBP11.46□□□□□ -0.58
PTPRD-207ENST00000463477 DCP1AQ9NPI6 582 aaPredicted RBP11.46□□□□□ -0.58
PTPRD-207ENST00000463477 ATP8A2Q9NTI2 1148 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 RTEL1Q9NZ71 1219 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 MRVI1Q9Y6F6 885 aa11.46□□□□□ -0.58
PTPRD-207ENST00000463477 MYH6P13533 1939 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 CXCL11O14625 94 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 MBD4O95243 580 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 PTMAP06454 111 aaKnown RBP11.45□□□□□ -0.58
PTPRD-207ENST00000463477 TPM2P07951 284 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 PTPRAP18433 802 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 GNAT2P19087 354 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 CAP2P40123 477 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 HAND2P61296 217 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 FBXO18Q8NFZ0 1043 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 BICD2Q8TD16 824 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 PTPN18Q99952 460 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 EHD4Q9H223 541 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 SAP30BPQ9UHR5 308 aaKnown RBP11.45□□□□□ -0.58
PTPRD-207ENST00000463477 KCNH4Q9UQ05 1017 aa11.45□□□□□ -0.58
PTPRD-207ENST00000463477 A0A1W2PQ27 194 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 A0A1W2PQ64 194 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 A0A1W2PQD8 194 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 FAM196BA6NMK8 535 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 GOLGA8BA8MQT2 603 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 PATL2C9JE40 543 aaKnown RBP11.44□□□□□ -0.58
PTPRD-207ENST00000463477 SH2B2O14492 632 aaPredicted RBP11.44□□□□□ -0.58
PTPRD-207ENST00000463477 NR1I2O75469 434 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 CDKL5O76039 1030 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 YEATS4O95619 227 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 CETPP11597 493 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 PLCD1P51178 756 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 SNAPC2Q13487 334 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 SGMS1Q86VZ5 419 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 CRACR2BQ8N4Y2 399 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms