RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 NACAP1Q9BZK3 213 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 OSBPL3Q9H4L5 887 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 ARHGEF10LQ9HCE6 1279 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 HELLSQ9NRZ9 838 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 SRRDQ9UH36 339 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 CCDC171Q6TFL3 1326 aa10.28□□□□□ -0.76
TMEM254-208ENST00000463209 RBBP6Q7Z6E9 1792 aaKnown RBP10.27□□□□□ -0.77
TMEM254-208ENST00000463209 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 NMT2O60551 498 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 GCLCP48506 637 aaPredicted RBP10.27□□□□□ -0.77
TMEM254-208ENST00000463209 FLT3LGP49771 235 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP14P54578 494 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 MTFR1Q15390 333 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 CATSPERGQ6ZRH7 1159 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 RASGRP2Q7LDG7 609 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 NBPF3Q9H094 633 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 PORCNQ9H237 461 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 DIAPH3Q9NSV4 1193 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 BTBD7Q9P203 1132 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 TMX2Q9Y320 296 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 COL11A1P12107 1806 aaPredicted RBP10.27□□□□□ -0.77
TMEM254-208ENST00000463209 LAMA4Q16363 1823 aa10.27□□□□□ -0.77
TMEM254-208ENST00000463209 HSPD1P10809 573 aaKnown RBP10.26□□□□□ -0.77
TMEM254-208ENST00000463209 ERVK-9P63128 1117 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 ERVK-24P63145 666 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 TFAP4Q01664 338 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 ARHGEF6Q15052 776 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 RRP12Q5JTH9 1297 aaKnown RBP10.26□□□□□ -0.77
TMEM254-208ENST00000463209 FAM83BQ5T0W9 1011 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 WDR78Q5VTH9 848 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 GPRC5AQ8NFJ5 357 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 ARMC5Q96C12 935 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 CEP95Q96GE4 821 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 ZNF333Q96JL9 665 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 CCDC17Q96LX7 622 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 VCPKMTQ9H867 229 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 FBXO28Q9NVF7 368 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 MORF4L1Q9UBU8 362 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 CLIP2Q9UDT6 1046 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 U3KPZ7 1027 aaPredicted RBP10.26□□□□□ -0.77
TMEM254-208ENST00000463209 CENPFP49454 3210 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 DOCK3Q8IZD9 2030 aa10.26□□□□□ -0.77
TMEM254-208ENST00000463209 IGKV6D-41A0A0C4DH26 115 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 FLOT1O75955 427 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 FGAP02671 866 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 TSPY3P0CV98 308 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 TSPY8P0CW00 308 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 EN2P19622 333 aaPredicted RBP10.25□□□□□ -0.77
TMEM254-208ENST00000463209 GRK4P32298 578 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 TRIM32Q13049 653 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 TBC1D10CQ8IV04 446 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 ZNF444Q8N0Y2 327 aaPredicted RBP10.25□□□□□ -0.77
TMEM254-208ENST00000463209 COA7Q96BR5 231 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 KANSL2Q9H9L4 492 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 TOMM22Q9NS69 142 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 BIN2Q9UBW5 565 aaPredicted RBP10.25□□□□□ -0.77
TMEM254-208ENST00000463209 MTMR7Q9Y216 660 aa10.25□□□□□ -0.77
TMEM254-208ENST00000463209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM254-208ENST00000463209 ADCY3O60266 1144 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 RANBP6O60518 1105 aaKnown RBP10.24□□□□□ -0.77
TMEM254-208ENST00000463209 NDUFB10O96000 172 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 GNRH1P01148 92 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 INHAP05111 366 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 CYP2B6P20813 491 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 HOXD10P28358 340 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 MLLT1Q03111 559 aaPredicted RBP10.24□□□□□ -0.77
TMEM254-208ENST00000463209 PDE4BQ07343 736 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 PLS1Q14651 629 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 GPR142Q7Z601 462 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 UNC93B1Q9H1C4 597 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 SH2D4AQ9H788 454 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 ISY1Q9ULR0 285 aaKnown RBP10.24□□□□□ -0.77
TMEM254-208ENST00000463209 NEDD4P46934 1319 aa10.24□□□□□ -0.77
TMEM254-208ENST00000463209 TSPY2A6NKD2 308 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 SLC3A2P08195 630 aaKnown RBP10.23□□□□□ -0.77
TMEM254-208ENST00000463209 CCL5P13501 91 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 DSG3P32926 999 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 PRMT2P55345 433 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 COG2Q14746 738 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 CCL14Q16627 93 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 CCAR1Q8IX12 1150 aaKnown RBP10.23□□□□□ -0.77
TMEM254-208ENST00000463209 NEDD1Q8NHV4 660 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 TRIB2Q92519 343 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 LPAR1Q92633 364 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 CWC22Q9HCG8 908 aaKnown RBP10.23□□□□□ -0.77
TMEM254-208ENST00000463209 GOPCQ9HD26 462 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 IL17RBQ9NRM6 502 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 MTMR4Q9NYA4 1195 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 GJD2Q9UKL4 321 aa10.23□□□□□ -0.77
TMEM254-208ENST00000463209 RABGAP1Q9Y3P9 1069 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms