RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SLC15A2Q16348 729 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 LONRF3Q496Y0 759 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 DHX40Q8IX18 779 aaKnown RBP11.69□□□□□ -0.54
MSH5-211ENST00000463144 STX8Q9UNK0 236 aa11.69□□□□□ -0.54
MSH5-211ENST00000463144 ZNF646O15015 1829 aaPredicted RBP11.68□□□□□ -0.54
MSH5-211ENST00000463144 CYTH3O43739 400 aa11.68□□□□□ -0.54
MSH5-211ENST00000463144 PICALMQ13492 652 aa11.68□□□□□ -0.54
MSH5-211ENST00000463144 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
MSH5-211ENST00000463144 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
MSH5-211ENST00000463144 ZNF287Q9HBT7 754 aa11.68□□□□□ -0.54
MSH5-211ENST00000463144 SCN9AQ15858 1988 aa11.68□□□□□ -0.54
MSH5-211ENST00000463144 PALM3A6NDB9 673 aaPredicted RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 H0YIN7 160 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 NOVP48745 357 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 GABPAQ06546 454 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 DPCR1Q3MIW9 517 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 PLA2G4DQ86XP0 818 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 KCNH3Q9ULD8 1083 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 MTMR7Q9Y216 660 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 SRPRBQ9Y5M8 271 aaKnown RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 BIN1O00499 593 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 ZNF500O60304 480 aaPredicted RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 APOBEC3HQ6NTF7 200 aaKnown RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 USP49Q70CQ1 688 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 FOXP4Q8IVH2 680 aaPredicted RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 CEP95Q96GE4 821 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 USP40Q9NVE5 1235 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 TUBE1Q9UJT0 475 aa11.67□□□□□ -0.54
MSH5-211ENST00000463144 MORC2Q9Y6X9 1032 aaPredicted RBP11.67□□□□□ -0.54
MSH5-211ENST00000463144 G3V3G9 751 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 GOLGA8HP0CJ92 632 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 ZNF75DP51815 510 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 NLRP12P59046 1061 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 NLRP5P59047 1200 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
MSH5-211ENST00000463144 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 KRBA2Q6ZNG9 492 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 SPC24Q8NBT2 197 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 C7orf43Q8WVR3 580 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 GPKOWQ92917 476 aaPredicted RBP eCLIP11.66□□□□□ -0.541e-7■■□□□ 11.9
MSH5-211ENST00000463144 TMX4Q9H1E5 349 aaPredicted RBP11.66□□□□□ -0.54
MSH5-211ENST00000463144 TTC12Q9H892 705 aaPredicted RBP11.66□□□□□ -0.54
MSH5-211ENST00000463144 PCDHAC2Q9Y5I4 1007 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 FOXN1O15353 648 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 GNAQP50148 359 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 PNOCQ13519 176 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 ZNF174Q15697 407 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 PDGFDQ9GZP0 370 aaPredicted RBP11.66□□□□□ -0.54
MSH5-211ENST00000463144 CSRNP2Q9H175 543 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 CPVLQ9H3G5 476 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 BRMS1Q9HCU9 246 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 CEP131Q9UPN4 1083 aa11.66□□□□□ -0.54
MSH5-211ENST00000463144 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
MSH5-211ENST00000463144 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
MSH5-211ENST00000463144 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.54
MSH5-211ENST00000463144 AOPEPQ8N6M6 819 aa11.65□□□□□ -0.54
MSH5-211ENST00000463144 SH3GLB2Q9NR46 395 aa11.65□□□□□ -0.54
MSH5-211ENST00000463144 GOLGA6L19H0YKK7 550 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 M0R2N6 131 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 SLURP2P0DP57 97 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 CRKP46108 304 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 NFIAQ12857 509 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 TTC38Q5R3I4 469 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 DACT2Q5SW24 774 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 WWC2Q6AWC2 1192 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 SARM1Q6SZW1 724 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 PIK3AP1Q6ZUJ8 805 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 CNNM3Q8NE01 707 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 TEKT1Q969V4 418 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 TRIM5Q9C035 493 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 OSBPL5Q9H0X9 879 aaPredicted RBP11.65□□□□□ -0.55
MSH5-211ENST00000463144 KCNF1Q9H3M0 494 aa11.65□□□□□ -0.55
MSH5-211ENST00000463144 MYH8P13535 1937 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 PLIN4Q96Q06 1357 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 IGKV6D-41A0A0C4DH26 115 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 KLRF2D3W0D1 207 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 POLR2DO15514 142 aaKnown RBP11.64□□□□□ -0.55
MSH5-211ENST00000463144 ECE2O60344 883 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 TOP1P11387 765 aaKnown RBP11.64□□□□□ -0.55
MSH5-211ENST00000463144 AKR1B1P15121 316 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 ZFPM1Q8IX07 1006 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 BLIDQ8IZY5 108 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 BPIFA3Q9BQP9 254 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 STK32BQ9NY57 414 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 FAM13BQ9NYF5 915 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 SERTAD1Q9UHV2 236 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
MSH5-211ENST00000463144 GOLGB1Q14789 3259 aaKnown RBP11.64□□□□□ -0.55
MSH5-211ENST00000463144 A0A087X0B3 334 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 BECN2A8MW95 431 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms