RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 ATAD5Q96QE3 1844 aa10□□□□□ -0.81
TMEM254-207ENST00000463029 SZT2Q5T011 3432 aa10□□□□□ -0.81
TMEM254-207ENST00000463029 MAPK4P31152 587 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 ERVK-9P63128 1117 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 ERVK-24P63145 666 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 E2F4Q16254 413 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 Q3C1V9 767 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 CERS3Q8IU89 383 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 ZNF454Q8N9F8 522 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 ANKLE1Q8NAG6 615 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 PANK1Q8TE04 598 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 GTF3C2Q8WUA4 911 aaPredicted RBP9.99□□□□□ -0.81
TMEM254-207ENST00000463029 SOCS4Q8WXH5 440 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 PORCNQ9H237 461 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 CWC22Q9HCG8 908 aaKnown RBP9.99□□□□□ -0.81
TMEM254-207ENST00000463029 IL1RAPL2Q9NP60 686 aa9.99□□□□□ -0.81
TMEM254-207ENST00000463029 XRCC5P13010 732 aaKnown RBP9.98□□□□□ -0.81
TMEM254-207ENST00000463029 ZKSCAN1P17029 563 aaPredicted RBP9.98□□□□□ -0.81
TMEM254-207ENST00000463029 RGS2P41220 211 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 PSEN2P49810 448 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 ABCB5Q2M3G0 1257 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 CERKLQ49MI3 558 aaPredicted RBP9.98□□□□□ -0.81
TMEM254-207ENST00000463029 PPP4R3BQ5MIZ7 849 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 TATDN1Q6P1N9 297 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 GPR142Q7Z601 462 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 PLEKHH3Q7Z736 793 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 TTC6Q86TZ1 520 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 C7orf61Q8IZ16 206 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 NBPF3Q9H094 633 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 BCL11AQ9H165 835 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 EHD4Q9H223 541 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 STAP2Q9UGK3 403 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 DOCK3Q8IZD9 2030 aa9.98□□□□□ -0.81
TMEM254-207ENST00000463029 MAGEB6P1A0A0J9YX57 407 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L15C9J2P7 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L13C9JLJ4 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L11C9JVI0 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L18D6R9N7 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L22D6RA61 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L17D6RBQ6 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L19D6RCP7 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L20D6RJB6 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 APBB1O00213 710 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 PLCD1P51178 756 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP14P54578 494 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 CCNA1P78396 465 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
TMEM254-207ENST00000463029 USP17L24Q0WX57 530 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 TTF1Q15361 905 aaPredicted RBP9.97□□□□□ -0.81
TMEM254-207ENST00000463029 HSP90AB4PQ58FF6 505 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 MAP3K21Q5TCX8 1036 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 WDR78Q5VTH9 848 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 TMED8Q6PL24 325 aaPredicted RBP9.97□□□□□ -0.81
TMEM254-207ENST00000463029 TRMT44Q8IYL2 757 aaKnown RBP9.97□□□□□ -0.81
TMEM254-207ENST00000463029 ACER1Q8TDN7 264 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 DNAJC2Q99543 621 aaKnown RBP9.97□□□□□ -0.81
TMEM254-207ENST00000463029 APBA2Q99767 749 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 RIOK1Q9BRS2 568 aaKnown RBP9.97□□□□□ -0.81
TMEM254-207ENST00000463029 C11orf49Q9H6J7 331 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 CABP5Q9NP86 173 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 OGDHLQ9ULD0 1010 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 ZMYND8Q9ULU4 1186 aaPredicted RBP9.97□□□□□ -0.81
TMEM254-207ENST00000463029 RABGAP1Q9Y3P9 1069 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 LAMA3Q16787 3333 aa9.97□□□□□ -0.81
TMEM254-207ENST00000463029 A0A1W2PPC1 479 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.82
TMEM254-207ENST00000463029 POLR3DP05423 398 aaPredicted RBP9.96□□□□□ -0.82
TMEM254-207ENST00000463029 PDE6AP16499 860 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 VCAM1P19320 739 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 SHMT1P34896 483 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 CACNB2Q08289 660 aaPredicted RBP9.96□□□□□ -0.82
TMEM254-207ENST00000463029 MMRN1Q13201 1228 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 CCL14Q16627 93 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 MORN1Q5T089 497 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 SLC9C2Q5TAH2 1124 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 RHPN1Q8TCX5 695 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 USP6NLQ92738 828 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 C12orf42Q96LP6 360 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 CRNKL1Q9BZJ0 848 aaKnown RBP9.96□□□□□ -0.82
TMEM254-207ENST00000463029 KIAA1683Q9H0B3 1180 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 FOCADQ5VW36 1801 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 CDK5RAP2Q96SN8 1893 aa9.96□□□□□ -0.82
TMEM254-207ENST00000463029 GOLIM4O00461 696 aa9.95□□□□□ -0.82
TMEM254-207ENST00000463029 MPHOSPH10O00566 681 aaKnown RBP9.95□□□□□ -0.82
TMEM254-207ENST00000463029 SOX1O00570 391 aaPredicted RBP9.95□□□□□ -0.82
TMEM254-207ENST00000463029 HMMRO75330 724 aa9.95□□□□□ -0.82
TMEM254-207ENST00000463029 CNMDO75829 334 aa9.95□□□□□ -0.82
TMEM254-207ENST00000463029 IFIT2P09913 472 aaKnown RBP9.95□□□□□ -0.82
TMEM254-207ENST00000463029 SYN1P17600 705 aa9.95□□□□□ -0.82
TMEM254-207ENST00000463029 CCND3P30281 292 aaPredicted RBP9.95□□□□□ -0.82
TMEM254-207ENST00000463029 MAP2K5Q13163 448 aa9.95□□□□□ -0.82
TMEM254-207ENST00000463029 CATSPERGQ6ZRH7 1159 aa9.95□□□□□ -0.82
TMEM254-207ENST00000463029 CLASRPQ8N2M8 674 aaKnown RBP9.95□□□□□ -0.82
TMEM254-207ENST00000463029 EDC3Q96F86 508 aaKnown RBP9.95□□□□□ -0.82
TMEM254-207ENST00000463029 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
TMEM254-207ENST00000463029 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
TMEM254-207ENST00000463029 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms