RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 AKNAD1Q5T1N1 836 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 FBXO46Q6PJ61 603 aaPredicted RBP14.33□□□□□ -0.12
HPS1-206ENST00000462743 SMCR8Q8TEV9 937 aaPredicted RBP14.33□□□□□ -0.12
HPS1-206ENST00000462743 STAG1Q8WVM7 1258 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
HPS1-206ENST00000462743 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 TCP11L1Q9NUJ3 509 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 HOXC10Q9NYD6 342 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 ZNF213O14771 459 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 TTLL1O95922 423 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 HERVK_113P62684 666 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 COG2Q14746 738 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 CLEC10AQ8IUN9 316 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 CEP95Q96GE4 821 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 NBPF3Q9H094 633 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 RBPJLQ9UBG7 517 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 TRIM17Q9Y577 477 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 RLFQ13129 1914 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
HPS1-206ENST00000462743 MGAMO43451 1857 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 WDR46O15213 610 aaKnown RBP14.31□□□□□ -0.12
HPS1-206ENST00000462743 HOXD10P28358 340 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 CTGFP29279 349 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 PSMC4P43686 418 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
HPS1-206ENST00000462743 FAM47AQ5JRC9 791 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 POTEEQ6S8J3 1075 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 MFSD6Q6ZSS7 791 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 SKAP1Q86WV1 359 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 ANKRD13CQ8N6S4 541 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 MAP4K1Q92918 833 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 ABHD8Q96I13 439 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 RPAP3Q9H6T3 665 aaPredicted RBP14.31□□□□□ -0.12
HPS1-206ENST00000462743 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 IL17RBQ9NRM6 502 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 CLIP2Q9UDT6 1046 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 PTPN22Q9Y2R2 807 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 RABGAP1Q9Y3P9 1069 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
HPS1-206ENST00000462743 TSPY2A6NKD2 308 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 F5H6K3 240 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 DSG3P32926 999 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 HAND2P61296 217 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 PTH1RQ03431 593 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 KLRC3Q07444 240 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
HPS1-206ENST00000462743 GMCL1P1Q8NEA9 526 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 GPRC5AQ8NFJ5 357 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 TTC14Q96N46 770 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
HPS1-206ENST00000462743 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
HPS1-206ENST00000462743 KIAA0100Q14667 2235 aaKnown RBP14.3□□□□□ -0.12
HPS1-206ENST00000462743 RANBP6O60518 1105 aaKnown RBP14.29□□□□□ -0.12
HPS1-206ENST00000462743 FCGRTP55899 365 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 ATP2B2Q01814 1243 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 Q3C1V9 767 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 ESYT1Q9BSJ8 1104 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 ARHGAP39Q9C0H5 1083 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 TXNRD2Q9NNW7 524 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 SRRDQ9UH36 339 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 LAMA4Q16363 1823 aa14.29□□□□□ -0.12
HPS1-206ENST00000462743 SPDYE16A6NNV3 312 aaPredicted RBP14.28□□□□□ -0.12
HPS1-206ENST00000462743 CNMDO75829 334 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 FMNL1O95466 1100 aaPredicted RBP14.28□□□□□ -0.12
HPS1-206ENST00000462743 NDUFB10O96000 172 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 ERVK-9P63128 1117 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 ERVK-24P63145 666 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 PARP14Q460N5 1801 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 CCDC178Q5BJE1 867 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 ANKS1AQ92625 1134 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 ESR2Q92731 530 aa14.28□□□□□ -0.12
HPS1-206ENST00000462743 PLA2G6O60733 806 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 IFFO2Q5TF58 517 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 SPICE1Q8N0Z3 855 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 KRT23Q9C075 422 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 LSG1Q9H089 658 aaKnown RBP14.27□□□□□ -0.13
HPS1-206ENST00000462743 CNNM2Q9H8M5 875 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 GJD2Q9UKL4 321 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 HPS5Q9UPZ3 1129 aa14.27□□□□□ -0.13
HPS1-206ENST00000462743 CDC45O75419 566 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 FLOT1O75955 427 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 CYP21A2P08686 494 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 TOP1P11387 765 aaKnown RBP14.26□□□□□ -0.13
HPS1-206ENST00000462743 MAPK4P31152 587 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 IRF5Q13568 498 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 RRP12Q5JTH9 1297 aaKnown RBP14.26□□□□□ -0.13
HPS1-206ENST00000462743 SLFN13Q68D06 897 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 RCSD1Q6JBY9 416 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 DGKHQ86XP1 1220 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 GMCL1Q96IK5 515 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 TANGO6Q9C0B7 1094 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 TOMM22Q9NS69 142 aa14.26□□□□□ -0.13
HPS1-206ENST00000462743 BTBD7Q9P203 1132 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms