RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TNKSO95271 1327 aa13.89□□□□□ -0.19
CPNE1-221ENST00000462352 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 ANTXR2P58335 489 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 MAP2K1Q02750 393 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-221ENST00000462352 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 TREML2Q5T2D2 321 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 OTUD7BQ6GQQ9 843 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 DGKHQ86XP1 1220 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 TTC14Q96N46 770 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 UBAC1Q9BSL1 405 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 SYNPO2Q9UMS6 1093 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
CPNE1-221ENST00000462352 F5H6K3 240 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 PDHXO00330 501 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 RAD21O60216 631 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 ALDH1A1P00352 501 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 TOP1P11387 765 aaKnown RBP13.87□□□□□ -0.19
CPNE1-221ENST00000462352 VCAM1P19320 739 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 MCM5P33992 734 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 KLRC3Q07444 240 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 SPICE1Q8N0Z3 855 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-221ENST00000462352 LPAR1Q92633 364 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 JAKMIP1Q96N16 626 aaKnown RBP13.87□□□□□ -0.19
CPNE1-221ENST00000462352 TMEM47Q9BQJ4 181 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 WBP1LQ9NX94 342 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 RNF186Q9NXI6 227 aa13.87□□□□□ -0.19
CPNE1-221ENST00000462352 MYH4Q9Y623 1939 aa13.86□□□□□ -0.19
CPNE1-221ENST00000462352 IFIT3O14879 490 aaKnown RBP13.86□□□□□ -0.19
CPNE1-221ENST00000462352 PRC1O43663 620 aa13.86□□□□□ -0.19
CPNE1-221ENST00000462352 PABPC4Q13310 644 aaKnown RBP eCLIP13.86□□□□□ -0.192e-15■■■□□ 17.2
CPNE1-221ENST00000462352 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
CPNE1-221ENST00000462352 SEC23AQ15436 765 aa13.86□□□□□ -0.19
CPNE1-221ENST00000462352 GMCL1P1Q8NEA9 526 aa13.86□□□□□ -0.19
CPNE1-221ENST00000462352 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
CPNE1-221ENST00000462352 ZCCHC17Q9NP64 241 aaKnown RBP13.86□□□□□ -0.19
CPNE1-221ENST00000462352 SLC45A1Q9Y2W3 748 aa13.86□□□□□ -0.19
CPNE1-221ENST00000462352 ERICH2A1L162 156 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 TRPA1O75762 1119 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 NDUFB10O96000 172 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 HMGB1P09429 215 aaKnown RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 PSMA5P28066 241 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 HOXA7P31268 230 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 ANAPC15P60006 121 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 EXOSC10Q01780 885 aaKnown RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 TAF1CQ15572 869 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 TMEM67Q5HYA8 995 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 IFIT1BQ5T764 474 aaKnown RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 DHX32Q7L7V1 743 aaKnown RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 IGDCC4Q8TDY8 1250 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 MTA3Q9BTC8 594 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 BEGAINQ9BUH8 593 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 RPAP3Q9H6T3 665 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-221ENST00000462352 KAT14Q9H8E8 782 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 PCNTO95613 3336 aa13.85□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L15C9J2P7 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L13C9JLJ4 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L11C9JVI0 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L18D6R9N7 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L22D6RA61 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L17D6RBQ6 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L19D6RCP7 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L20D6RJB6 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 SH2B2O14492 632 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-221ENST00000462352 CYP2C8P10632 490 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 CPA1P15085 419 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
CPNE1-221ENST00000462352 USP17L24Q0WX57 530 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 WTAPQ15007 396 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 FAM83BQ5T0W9 1011 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 SLFN13Q68D06 897 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 BLOC1S2Q6QNY1 142 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 RASGRP2Q7LDG7 609 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 PNMA1Q8ND90 353 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 TMEM87BQ96K49 555 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 TCEANC2Q96MN5 208 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 LRRC2Q9BYS8 371 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 ASCC2Q9H1I8 757 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-221ENST00000462352 SENP2Q9HC62 589 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 GPHNQ9NQX3 736 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-221ENST00000462352 SAGE1Q9NXZ1 904 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 PNMA3Q9UL41 463 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 MTMR7Q9Y216 660 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 WDR19Q8NEZ3 1342 aa13.84□□□□□ -0.19
CPNE1-221ENST00000462352 CA12O43570 354 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 BMP3P12645 472 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 OSBPP22059 807 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
CPNE1-221ENST00000462352 CRHR2Q13324 411 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 IL17RAQ96F46 866 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 GMCL1Q96IK5 515 aa13.83□□□□□ -0.2
CPNE1-221ENST00000462352 PARK7Q99497 189 aaKnown RBP13.83□□□□□ -0.2
CPNE1-221ENST00000462352 NUP88Q99567 741 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms