RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
GTF3C5-208ENST00000461871 hCG_1984214I3L0E3 225 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 NCLP19338 710 aaKnown RBP16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 NBR1Q14596 966 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 RASA3Q14644 834 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 TEX2Q8IWB9 1127 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 CCDC144CPQ8IYA2 1237 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 ZNF713Q8N859 430 aaPredicted RBP16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 PHKBQ93100 1093 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 FOXP1Q9H334 677 aaPredicted RBP16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 LMBRD1Q9NUN5 540 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 CLIP2Q9UDT6 1046 aa16.32■□□□□ 0.2
GTF3C5-208ENST00000461871 SIPA1L1O43166 1804 aa16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 MBD3O95983 291 aa16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 DCAF15Q66K64 600 aa16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 KRT40Q6A162 431 aa16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 DCAF4Q8WV16 495 aa16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 L3MBTL3Q96JM7 780 aaPredicted RBP16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 ADARB2Q9NS39 739 aaKnown RBP16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
GTF3C5-208ENST00000461871 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 TRAK2O60296 914 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 ASNSP08243 561 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 PDHBP11177 359 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 CALML3P27482 149 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 PKN1Q16512 942 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 PFKFB3Q16875 520 aaPredicted RBP16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 KLHL40Q2TBA0 621 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 ZC3H15Q8WU90 426 aaKnown RBP16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 SH2D4AQ9H788 454 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
GTF3C5-208ENST00000461871 CNTNAP5Q8WYK1 1306 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 CAPN15O75808 1086 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 MMP1P03956 469 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 SCG2P13521 617 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 CAP2P40123 477 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 C9orf131Q5VYM1 1079 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 SAMD7Q7Z3H4 446 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 CCDC12Q8WUD4 166 aaPredicted RBP16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 GMCL1Q96IK5 515 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 TMEM39BQ9GZU3 492 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 DEFB129Q9H1M3 183 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 HACL1Q9UJ83 578 aa16.29■□□□□ 0.2
GTF3C5-208ENST00000461871 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 PLEKHA8P1O95397 391 aa16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 EEF2P13639 858 aaKnown RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 GUCY1A2P33402 732 aa16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 KIF23Q02241 960 aaPredicted RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 ICA1Q05084 483 aa16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 DNM1Q05193 864 aaKnown RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 TRAF1Q13077 416 aa16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 SUPT20HL1Q3ZLR7 823 aa16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 FOXD4L5Q5VV16 416 aaPredicted RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 FOXD4L4Q8WXT5 416 aaPredicted RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 RCOR1Q9UKL0 485 aa16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 MORC2Q9Y6X9 1032 aaPredicted RBP16.28■□□□□ 0.2
GTF3C5-208ENST00000461871 PLA2G6O60733 806 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 PRPF40AO75400 957 aaKnown RBP16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 UBE2HP62256 183 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 SEPT2Q15019 361 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 GPR162Q16538 588 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 USP48Q86UV5 1035 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 FERMT3Q86UX7 667 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 SIAH1Q8IUQ4 282 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 PHF20Q9BVI0 1012 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 RTEL1Q9NZ71 1219 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 ZNF112Q9UJU3 913 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 TMX2Q9Y320 296 aa16.27■□□□□ 0.2
GTF3C5-208ENST00000461871 MYH6P13533 1939 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 YEATS4O95619 227 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 GH2P01242 217 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 RILPL1Q5EBL4 403 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 STAG2Q8N3U4 1231 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 ZNF341Q9BYN7 854 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
GTF3C5-208ENST00000461871 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
GTF3C5-208ENST00000461871 SHTN1A0MZ66 631 aa16.25■□□□□ 0.19
GTF3C5-208ENST00000461871 GLTPD2A6NH11 291 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms