RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 GRK4P32298 578 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 IFRD2Q12894 506 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 RASGRF1Q13972 1273 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 RASA3Q14644 834 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 BMS1Q14692 1282 aaKnown RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 NCAPHQ15003 741 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 BBS9Q3SYG4 887 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 SLC6A19Q695T7 634 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 MPRIPQ6WCQ1 1025 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 ATG4DQ86TL0 474 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 WFDC3Q8IUB2 231 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 EZH1Q92800 747 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 SMARCC1Q92922 1105 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 WDR89Q96FK6 387 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 FANCD2OSQ96PS1 177 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 EPN3Q9H201 632 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 TMX1Q9H3N1 280 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 GSX1Q9H4S2 264 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-212ENST00000461608 CNNM2Q9H8M5 875 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 SNTG2Q9NY99 539 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 FAM53CQ9NYF3 392 aa4.51□□□□□ -1.69
HDAC6-212ENST00000461608 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.5□□□□□ -1.69
HDAC6-212ENST00000461608 RAG1P15918 1043 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF143P52747 638 aaPredicted RBP4.5□□□□□ -1.69
HDAC6-212ENST00000461608 SOX4Q06945 474 aaPredicted RBP4.5□□□□□ -1.69
HDAC6-212ENST00000461608 TAF7LQ5H9L4 462 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 AKAP4Q5JQC9 854 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 GIMAP6Q6P9H5 292 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 CDC37L1Q7L3B6 337 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 ZAR1Q86SH2 424 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 MCATQ8IVS2 390 aaKnown RBP4.5□□□□□ -1.69
HDAC6-212ENST00000461608 FAM177A1Q8N128 213 aaPredicted RBP4.5□□□□□ -1.69
HDAC6-212ENST00000461608 FAM169BQ8N8A8 192 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 FAM13CQ8NE31 585 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 ST13P5Q8NFI4 369 aaPredicted RBP4.5□□□□□ -1.69
HDAC6-212ENST00000461608 DHRS1Q96LJ7 313 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 PAK6Q9NQU5 681 aaPredicted RBP4.5□□□□□ -1.69
HDAC6-212ENST00000461608 KLHL3Q9UH77 587 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 TBX22Q9Y458 520 aa4.5□□□□□ -1.69
HDAC6-212ENST00000461608 A0A1W2PQH9 124 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 LRRC10BA6NIK2 292 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 SLC22A31A6NKX4 558 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 ENPP3O14638 875 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 PDPK1O15530 556 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 NFICP08651 508 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 RAB6AP20340 208 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 PPP2R5EQ16537 467 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF792Q3KQV3 632 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 PPM1JQ5JR12 505 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 LARP1BQ659C4 914 aaKnown RBP4.49□□□□□ -1.69
HDAC6-212ENST00000461608 EEPD1Q7L9B9 569 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 TTC6Q86TZ1 520 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 C12orf40Q86WS4 652 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 ANKLE2Q86XL3 938 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 PHACTR4Q8IZ21 702 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 MFSD2AQ8NA29 543 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 CYB5D2Q8WUJ1 264 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 ACSF2Q96CM8 615 aaPredicted RBP4.49□□□□□ -1.69
HDAC6-212ENST00000461608 ATG4CQ96DT6 458 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 MISP3Q96FF7 219 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 TMEM87BQ96K49 555 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 SEMA6CQ9H3T2 930 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 PIF1Q9H611 641 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 RC3H2Q9HBD1 1191 aaKnown RBP4.49□□□□□ -1.69
HDAC6-212ENST00000461608 FAM105AQ9NUU6 356 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 CORINQ9Y5Q5 1042 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 U3KQE9 123 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 CADPSQ9ULU8 1353 aa4.49□□□□□ -1.69
HDAC6-212ENST00000461608 LRIG2O94898 1065 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 NTF4P34130 210 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 CDK8P49336 464 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 CHMP4BP1P59074 171 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 MAP7Q14244 749 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 TTLL4Q14679 1199 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 SDE2Q6IQ49 451 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF574Q6ZN55 896 aaPredicted RBP4.48□□□□□ -1.69
HDAC6-212ENST00000461608 ZNF765Q7L2R6 523 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 COX4I2Q96KJ9 171 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 CCDC74BQ96LY2 380 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.48□□□□□ -1.69
HDAC6-212ENST00000461608 DISC1Q9NRI5 854 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 C1GALT1Q9NS00 363 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 TJP2Q9UDY2 1190 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 ZC3H7BQ9UGR2 993 aaKnown RBP4.48□□□□□ -1.69
HDAC6-212ENST00000461608 PCOLCE2Q9UKZ9 415 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 PPP1R9AQ9ULJ8 1098 aa4.48□□□□□ -1.69
HDAC6-212ENST00000461608 RGS13O14921 159 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 DDAH1O94760 285 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 CST3P01034 146 aaPredicted RBP4.47□□□□□ -1.69
HDAC6-212ENST00000461608 HSD3B2P26439 372 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 ASPAP45381 313 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 RNF4P78317 190 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 ARSHQ5FYA8 562 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 ZC3H12BQ5HYM0 836 aaKnown RBP4.47□□□□□ -1.69
HDAC6-212ENST00000461608 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 VHLLQ6RSH7 139 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 SEZ6L2Q6UXD5 910 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 DYMQ7RTS9 669 aa4.47□□□□□ -1.69
HDAC6-212ENST00000461608 SIAH1Q8IUQ4 282 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms