RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 CHURC1-FNTBB4DL54 471 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 GRIN3BO60391 1043 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 SORBS3O60504 671 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 KCNA10Q16322 511 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 SNAP47Q5SQN1 464 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 SIAH1Q8IUQ4 282 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 PHACTR4Q8IZ21 702 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 LILRA2Q8N149 483 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 BAHD1Q8TBE0 780 aaPredicted RBP6.96□□□□□ -1.3
COL21A1-205ENST00000461489 KCNN1Q92952 543 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 CCDC74BQ96LY2 380 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 KREMEN1Q96MU8 473 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 TMEM74Q96NL1 305 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 MRS2Q9HD23 443 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
COL21A1-205ENST00000461489 FITM1A5D6W6 292 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 ETV2O00321 342 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-205ENST00000461489 HTR3BO95264 441 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 FAM160A1Q05DH4 1040 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 PWP1Q13610 501 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 CLEC16AQ2KHT3 1053 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 DNAJC14Q6Y2X3 702 aaPredicted RBP6.95□□□□□ -1.3
COL21A1-205ENST00000461489 RHOVQ96L33 236 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 ASPNQ9BXN1 380 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 SLC6A17Q9H1V8 727 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 SP110Q9HB58 689 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 CD320Q9NPF0 282 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 PRR36Q9H6K5 1346 aa6.95□□□□□ -1.3
COL21A1-205ENST00000461489 MED14OSP0DP75 135 aa6.94□□□□□ -1.3
COL21A1-205ENST00000461489 GLDCP23378 1020 aa6.94□□□□□ -1.3
COL21A1-205ENST00000461489 CIAPIN1Q6FI81 312 aa6.94□□□□□ -1.3
COL21A1-205ENST00000461489 FBXO33Q7Z6M2 555 aa6.94□□□□□ -1.3
COL21A1-205ENST00000461489 GOLM1Q8NBJ4 401 aa6.94□□□□□ -1.3
COL21A1-205ENST00000461489 RSRP1Q9BUV0 290 aa6.94□□□□□ -1.3
COL21A1-205ENST00000461489 SMG5Q9UPR3 1016 aaKnown RBP6.94□□□□□ -1.3
COL21A1-205ENST00000461489 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-205ENST00000461489 MINDY4BA8MYZ0 360 aa6.93□□□□□ -1.3
COL21A1-205ENST00000461489 GBP1P32455 592 aa6.93□□□□□ -1.3
COL21A1-205ENST00000461489 TIGD5Q53EQ6 642 aa6.93□□□□□ -1.3
COL21A1-205ENST00000461489 SPPL2CQ8IUH8 684 aa6.93□□□□□ -1.3
COL21A1-205ENST00000461489 KIF2CQ99661 725 aa6.93□□□□□ -1.3
COL21A1-205ENST00000461489 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
COL21A1-205ENST00000461489 ASCC2Q9H1I8 757 aaPredicted RBP6.93□□□□□ -1.3
COL21A1-205ENST00000461489 CWC22Q9HCG8 908 aaKnown RBP6.93□□□□□ -1.3
COL21A1-205ENST00000461489 RBM47A0AV96 593 aaKnown RBP6.92□□□□□ -1.3
COL21A1-205ENST00000461489 SHISA3A0PJX4 238 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 CHRNEQ04844 493 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 DUSP4Q13115 394 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 MLECQ14165 292 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 MPP2Q14168 576 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 NR0B2Q15466 257 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 IRF2BP1Q8IU81 584 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 FBXO27Q8NI29 283 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 GPR160Q9UJ42 338 aa6.92□□□□□ -1.3
COL21A1-205ENST00000461489 TLR3O15455 904 aaKnown RBP6.91□□□□□ -1.3
COL21A1-205ENST00000461489 NUAK1O60285 661 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 DNAJA2O60884 412 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 PDIA4P13667 645 aaKnown RBP6.91□□□□□ -1.3
COL21A1-205ENST00000461489 ITGAEP38570 1179 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 LINC00310P59036 64 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 TAGLNQ01995 201 aaKnown RBP6.91□□□□□ -1.3
COL21A1-205ENST00000461489 TEKQ02763 1124 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 REC114Q7Z4M0 266 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 ZNF605Q86T29 641 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 ANKS4BQ8N8V4 417 aa6.91□□□□□ -1.3
COL21A1-205ENST00000461489 INTS4Q96HW7 963 aaKnown RBP6.91□□□□□ -1.3
COL21A1-205ENST00000461489 PDE6BP35913 854 aa6.9□□□□□ -1.3
COL21A1-205ENST00000461489 AMIGO3Q86WK7 504 aa6.9□□□□□ -1.3
COL21A1-205ENST00000461489 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
COL21A1-205ENST00000461489 RAG1P15918 1043 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 RNF4P78317 190 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 NMIQ13287 307 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-205ENST00000461489 SNX17Q15036 470 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 CWF19L2Q2TBE0 894 aaKnown RBP6.89□□□□□ -1.31
COL21A1-205ENST00000461489 TMEM132EQ6IEE7 984 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 FAM196AQ6ZSG2 479 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 MCOLN1Q9GZU1 580 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 KBTBD4Q9NVX7 518 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 EBF1Q9UH73 591 aa6.89□□□□□ -1.31
COL21A1-205ENST00000461489 RGS13O14921 159 aa6.88□□□□□ -1.31
COL21A1-205ENST00000461489 PSPNO60542 156 aa6.88□□□□□ -1.31
COL21A1-205ENST00000461489 GARTP22102 1010 aa6.88□□□□□ -1.31
COL21A1-205ENST00000461489 RPL10P27635 214 aaKnown RBP6.88□□□□□ -1.31
COL21A1-205ENST00000461489 ARSHQ5FYA8 562 aa6.88□□□□□ -1.31
COL21A1-205ENST00000461489 LILRA6Q6PI73 481 aa6.88□□□□□ -1.31
COL21A1-205ENST00000461489 ENOX1Q8TC92 643 aaKnown RBP6.88□□□□□ -1.31
COL21A1-205ENST00000461489 IRF2BPLQ9H1B7 796 aa6.88□□□□□ -1.31
COL21A1-205ENST00000461489 MYOCOSA0A1B0GUC4 107 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 SSU72P8A0A1W2PR75 194 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 KRTAP9-7A8MTY7 169 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 PEX10O60683 326 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 SEMA7AO75326 666 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 GALK1P51570 392 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 DLG4P78352 724 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 RNF111Q6ZNA4 994 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 TTLL10Q6ZVT0 673 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 WAPLQ7Z5K2 1190 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
COL21A1-205ENST00000461489 LINC01599Q8WXQ3 324 aa6.87□□□□□ -1.31
COL21A1-205ENST00000461489 VWCEQ96DN2 955 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms