RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TP53P04637 393 aaPredicted RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 NEFMP07197 916 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 RXRBP28702 533 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 NKG7Q16617 165 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 C2orf27AQ580R0 203 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 TDRD10Q5VZ19 366 aaKnown RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 MCTP1Q6DN14 999 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 MRM1Q6IN84 353 aaKnown RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 SPATC1Q76KD6 591 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 ANKRD13AQ8IZ07 590 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 LRRC47Q8N1G4 583 aaKnown RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 MFSD2AQ8NA29 543 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 C2CD4AQ8NCU7 369 aaPredicted RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 BAHD1Q8TBE0 780 aaPredicted RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 THAP3Q8WTV1 239 aaPredicted RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 CYB5D2Q8WUJ1 264 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 IPO9Q96P70 1041 aaKnown RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 MKRN2Q9H000 416 aaKnown RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.55□□□□□ -1.68
VCL-203ENST00000461383 EPN3Q9H201 632 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 FAM105AQ9NUU6 356 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 SUCOQ9UBS9 1254 aaKnown RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 ZNF214Q9UL59 606 aaPredicted RBP4.55□□□□□ -1.68
VCL-203ENST00000461383 RAXQ9Y2V3 346 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 DAGLAQ9Y4D2 1042 aa4.55□□□□□ -1.68
VCL-203ENST00000461383 PPP1R12AO14974 1030 aaPredicted RBP4.54□□□□□ -1.68
VCL-203ENST00000461383 IBSPP21815 317 aaPredicted RBP4.54□□□□□ -1.68
VCL-203ENST00000461383 NTF4P34130 210 aa4.54□□□□□ -1.68
VCL-203ENST00000461383 PMS1P54277 932 aaKnown RBP4.54□□□□□ -1.68
VCL-203ENST00000461383 SLBPQ14493 270 aaKnown RBP eCLIP4.54□□□□□ -1.68
VCL-203ENST00000461383 HEATR6Q6AI08 1181 aaKnown RBP4.54□□□□□ -1.68
VCL-203ENST00000461383 ARMCX6Q7L4S7 300 aa4.54□□□□□ -1.68
VCL-203ENST00000461383 SMARCC1Q92922 1105 aaPredicted RBP4.54□□□□□ -1.68
VCL-203ENST00000461383 ZNF669Q96BR6 464 aaPredicted RBP4.54□□□□□ -1.68
VCL-203ENST00000461383 MIPEPQ99797 713 aa4.54□□□□□ -1.68
VCL-203ENST00000461383 GBP3Q9H0R5 595 aa4.54□□□□□ -1.68
VCL-203ENST00000461383 LGR6Q9HBX8 967 aa4.54□□□□□ -1.68
VCL-203ENST00000461383 ZMYM5Q9UJ78 669 aa4.54□□□□□ -1.68
VCL-203ENST00000461383 SUGT1Q9Y2Z0 365 aa4.54□□□□□ -1.68
VCL-203ENST00000461383 COL17A1Q9UMD9 1497 aaPredicted RBP4.54□□□□□ -1.68
VCL-203ENST00000461383 ANKRD34BA5PLL1 514 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 DIAPH1O60610 1272 aaKnown RBP4.53□□□□□ -1.68
VCL-203ENST00000461383 UBOX5O94941 541 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 IGLV1-40P01703 118 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 CDK11BP21127 795 aaKnown RBP4.53□□□□□ -1.68
VCL-203ENST00000461383 CAP2P40123 477 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 PREPP48147 710 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 SLC10A6Q3KNW5 377 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 C16orf86Q6ZW13 317 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 UBE3DQ7Z6J8 389 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 ADAT2Q7Z6V5 191 aaKnown RBP4.53□□□□□ -1.68
VCL-203ENST00000461383 TMEM192Q8IY95 271 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 ARMC10Q8N2F6 343 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 ZSWIM2Q8NEG5 633 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 KLHL6Q8WZ60 621 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 ZNF512BQ96KM6 892 aaPredicted RBP4.53□□□□□ -1.68
VCL-203ENST00000461383 UBL7Q96S82 380 aaPredicted RBP4.53□□□□□ -1.68
VCL-203ENST00000461383 APBA2Q99767 749 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 SPATA9Q9BWV2 254 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 KANSL2Q9H9L4 492 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 LEMD3Q9Y2U8 911 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 PTCH2Q9Y6C5 1203 aa4.53□□□□□ -1.68
VCL-203ENST00000461383 NFICP08651 508 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 ETV3P41162 512 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 ZNF143P52747 638 aaPredicted RBP4.52□□□□□ -1.69
VCL-203ENST00000461383 RNF4P78317 190 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 MAP7Q14244 749 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 TCEA2Q15560 299 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 PLEKHG4Q58EX7 1191 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 LETMD1Q6P1Q0 360 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 FILIP1Q7Z7B0 1213 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 ZCRB1Q8TBF4 217 aaKnown RBP4.52□□□□□ -1.69
VCL-203ENST00000461383 FBLIM1Q8WUP2 373 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 UTP4Q969X6 686 aaKnown RBP4.52□□□□□ -1.69
VCL-203ENST00000461383 FAM46AQ96IP4 442 aaKnown RBP4.52□□□□□ -1.69
VCL-203ENST00000461383 CDC6Q99741 560 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 HAUS7Q99871 368 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 KCNF1Q9H3M0 494 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 GSX1Q9H4S2 264 aaPredicted RBP4.52□□□□□ -1.69
VCL-203ENST00000461383 GOLGA2P5Q9HBQ8 144 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 PCMTD2Q9NV79 361 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 TMEM260Q9NX78 707 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 FBXL21Q9UKT6 434 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 TPX2Q9ULW0 747 aaKnown RBP4.52□□□□□ -1.69
VCL-203ENST00000461383 CEP131Q9UPN4 1083 aa4.52□□□□□ -1.69
VCL-203ENST00000461383 hCG_2014768A0A024R1R8 64 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 C9IYK1 514 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 NOP56O00567 594 aaKnown RBP4.51□□□□□ -1.69
VCL-203ENST00000461383 DHX15O43143 795 aaKnown RBP4.51□□□□□ -1.69
VCL-203ENST00000461383 PPM1BO75688 479 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 ASMTLO95671 621 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 EPHX1P07099 455 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 SPINK2P20155 84 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 SQSTM1Q13501 440 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 HSP90AA2PQ14568 343 aaPredicted RBP4.51□□□□□ -1.69
VCL-203ENST00000461383 SGO2Q562F6 1265 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 NOL9Q5SY16 702 aaKnown RBP4.51□□□□□ -1.69
VCL-203ENST00000461383 DCAF15Q66K64 600 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 CDPF1Q6NVV7 123 aa4.51□□□□□ -1.69
VCL-203ENST00000461383 CDH24Q86UP0 819 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms