RNA–Protein interactions for RNA: ENST00000461370.1

CCT4-202, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2

Gene CCT4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-202ENST00000461370 ADAMTS1Q9UHI8 967 aa6.65□□□□□ -1.34
CCT4-202ENST00000461370 CAPN6Q9Y6Q1 641 aa6.65□□□□□ -1.34
CCT4-202ENST00000461370 PITPNM2Q9BZ72 1349 aa6.65□□□□□ -1.35
CCT4-202ENST00000461370 POGZQ7Z3K3 1410 aa6.65□□□□□ -1.35
CCT4-202ENST00000461370 CBX7O95931 251 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 RECKO95980 971 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 FUT4P22083 530 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 VAMP1P23763 118 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 CEBPAP49715 358 aaPredicted RBP6.64□□□□□ -1.35
CCT4-202ENST00000461370 IKZF1Q13422 519 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 CBLL1Q75N03 491 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 DNAJB8Q8NHS0 232 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 CNTNAP4Q9C0A0 1308 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 PHLDB1Q86UU1 1377 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 KIF27Q86VH2 1401 aa6.64□□□□□ -1.35
CCT4-202ENST00000461370 UPK3BL1B0FP48 263 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 UPK3BL2E5RIL1 263 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
CCT4-202ENST00000461370 CRKP46108 304 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 APOBRQ0VD83 1088 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 ZNF792Q3KQV3 632 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 USP48Q86UV5 1035 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 KIAA0825Q8IV33 1275 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 SPON2Q9BUD6 331 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 BRMS1Q9HCU9 246 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 UBP1Q9NZI7 540 aa6.63□□□□□ -1.35
CCT4-202ENST00000461370 PCF11O94913 1555 aaKnown RBP6.62□□□□□ -1.35
CCT4-202ENST00000461370 UHRF1BP1LA0JNW5 1464 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 H3BS24 57 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 TNNI2P48788 182 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 CDKAL1Q5VV42 579 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 PHACTR4Q8IZ21 702 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 PPP1R13LQ8WUF5 828 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 HSPA12BQ96MM6 686 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 CEP131Q9UPN4 1083 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
CCT4-202ENST00000461370 WDR7Q9Y4E6 1490 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 PLEKHD1A6NEE1 506 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 SCAMP3O14828 347 aaKnown RBP6.61□□□□□ -1.35
CCT4-202ENST00000461370 DNAJA2O60884 412 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 SEZ6Q53EL9 994 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 THAP5Q7Z6K1 395 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 PIWIL2Q8TC59 973 aaKnown RBP6.61□□□□□ -1.35
CCT4-202ENST00000461370 PI4K2BQ8TCG2 481 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 RNF34Q969K3 372 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 MRRFQ96E11 262 aaKnown RBP6.61□□□□□ -1.35
CCT4-202ENST00000461370 CCDC74BQ96LY2 380 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 NT5C1AQ9BXI3 368 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 RC3H2Q9HBD1 1191 aaKnown RBP6.61□□□□□ -1.35
CCT4-202ENST00000461370 SEMA3GQ9NS98 782 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 GMIPQ9P107 970 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 ST14Q9Y5Y6 855 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 SPATA31D1Q6ZQQ2 1576 aa6.61□□□□□ -1.35
CCT4-202ENST00000461370 YEATS2Q9ULM3 1422 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 TOM1O60784 492 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 ATE1O95260 518 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 ZEB1P37275 1124 aaPredicted RBP6.6□□□□□ -1.35
CCT4-202ENST00000461370 RANGAP1P46060 587 aaPredicted RBP6.6□□□□□ -1.35
CCT4-202ENST00000461370 ZP2Q05996 745 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 TNK2Q07912 1038 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 ZNF394Q53GI3 561 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 SLC23A3Q6PIS1 610 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 ATP13A1Q9HD20 1204 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 ADAMTS6Q9UKP5 1117 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 CCDC9Q9Y3X0 531 aaKnown RBP6.6□□□□□ -1.35
CCT4-202ENST00000461370 PCDHGB7Q9Y5F8 929 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 MAGI3Q5TCQ9 1506 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 RUSC2Q8N2Y8 1516 aa6.6□□□□□ -1.35
CCT4-202ENST00000461370 RNASE1P07998 156 aaKnown RBP6.59□□□□□ -1.35
CCT4-202ENST00000461370 MCM4P33991 863 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 ZNF165P49910 485 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 CHMP4BP1P59074 171 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 GK5Q6ZS86 529 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 REXO1Q8N1G1 1221 aaKnown RBP6.59□□□□□ -1.35
CCT4-202ENST00000461370 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 RNF141Q8WVD5 230 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 NKD1Q969G9 470 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 Q96M66 194 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 EHMT1Q9H9B1 1298 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
CCT4-202ENST00000461370 KDM5BQ9UGL1 1544 aa6.59□□□□□ -1.35
CCT4-202ENST00000461370 PAX4O43316 350 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 RAG1P15918 1043 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 ITGB5P18084 799 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 ARSHQ5FYA8 562 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 SLITRK4Q8IW52 837 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 BAHD1Q8TBE0 780 aaPredicted RBP6.58□□□□□ -1.36
CCT4-202ENST00000461370 EAF1Q96JC9 268 aaPredicted RBP6.58□□□□□ -1.36
CCT4-202ENST00000461370 KIF2CQ99661 725 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 ASPNQ9BXN1 380 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 PRDM7Q9NQW5 492 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 KCNH3Q9ULD8 1083 aa6.58□□□□□ -1.36
CCT4-202ENST00000461370 SLC22A31A6NKX4 558 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 BIN1O00499 593 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 JUNBP17275 347 aaPredicted RBP6.57□□□□□ -1.36
CCT4-202ENST00000461370 GBP1P32455 592 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 DTWD2Q8NBA8 298 aa6.57□□□□□ -1.36
CCT4-202ENST00000461370 LRRN4CLQ8ND94 238 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms