RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
NCL-207ENST00000461347 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
NCL-207ENST00000461347 EPN1Q9Y6I3 576 aaPredicted RBP16.23■□□□□ 0.19
NCL-207ENST00000461347 TOPAZ1Q8N9V7 1692 aa16.23■□□□□ 0.19
NCL-207ENST00000461347 ADGRL3Q9HAR2 1447 aa16.23■□□□□ 0.19
NCL-207ENST00000461347 MROH7-TTC4A0A0A0MT08 1334 aa16.23■□□□□ 0.19
NCL-207ENST00000461347 TEX33O43247 280 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 PTPREP23469 700 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 GTF2A1P52655 376 aaPredicted RBP16.22■□□□□ 0.19
NCL-207ENST00000461347 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 DIP2AQ14689 1571 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
NCL-207ENST00000461347 ZMYND10O75800 440 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 NEDD4P46934 1319 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 NPHP4O75161 1426 aaPredicted RBP16.22■□□□□ 0.19
NCL-207ENST00000461347 USP17L12C9JPN9 530 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 USP17L21D6R901 530 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 TCERG1LQ5VWI1 586 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 ADAM21Q9UKJ8 722 aa16.22■□□□□ 0.19
NCL-207ENST00000461347 COPB1P53618 953 aaKnown RBP16.21■□□□□ 0.19
NCL-207ENST00000461347 ANTXR2P58335 489 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 PPARDQ03181 441 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 CT47A1Q5JQC4 288 aaPredicted RBP16.21■□□□□ 0.19
NCL-207ENST00000461347 SND1Q7KZF4 910 aaKnown RBP eCLIP16.21■□□□□ 0.196e-8■□□□□ 9.5
NCL-207ENST00000461347 GPATCH11Q8N954 259 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 GSDMAQ96QA5 445 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 BICDL2A1A5D9 508 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 ERLIN2O94905 339 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 LIFRP42702 1097 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 STRBPQ96SI9 672 aaKnown RBP16.21■□□□□ 0.19
NCL-207ENST00000461347 DENND2AQ9ULE3 1009 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 SRPRBQ9Y5M8 271 aaKnown RBP16.21■□□□□ 0.19
NCL-207ENST00000461347 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 MROH5Q6ZUA9 1318 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 GOLGA6CA6NDK9 693 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 GOLGA6DP0CG33 693 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 GNAQP50148 359 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 GIGYF2Q6Y7W6 1299 aaKnown RBP16.21■□□□□ 0.19
NCL-207ENST00000461347 ATRIPQ8WXE1 791 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 GOLGA6AQ9NYA3 693 aa16.21■□□□□ 0.19
NCL-207ENST00000461347 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.18
NCL-207ENST00000461347 NUTM2BA6NNL0 878 aaPredicted RBP16.2■□□□□ 0.18
NCL-207ENST00000461347 NUTM2EB1AL46 878 aaPredicted RBP16.2■□□□□ 0.18
NCL-207ENST00000461347 OPA1O60313 960 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 RNASE9P60153 205 aaKnown RBP16.2■□□□□ 0.18
NCL-207ENST00000461347 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 LRRN4CLQ8ND94 238 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 PLEKHA4Q9H4M7 779 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 ABCB6Q9NP58 842 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.181e-72■■■■□ 26.6
NCL-207ENST00000461347 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
NCL-207ENST00000461347 GOLGA5Q8TBA6 731 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 OXER1Q8TDS5 423 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.183e-6■■■□□ 15.6
NCL-207ENST00000461347 VAV2P52735 878 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 TAX1BP1Q86VP1 789 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 L2HGDHQ9H9P8 463 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
NCL-207ENST00000461347 GOLGA6BA6NDN3 693 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 ADAMTS2O95450 1211 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 NCAPH2Q6IBW4 605 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 SECISBP2LQ93073 1101 aaKnown RBP16.19■□□□□ 0.18
NCL-207ENST00000461347 GUCY1A2P33402 732 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 GYG1P46976 350 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.182e-7■■□□□ 13.8
NCL-207ENST00000461347 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
NCL-207ENST00000461347 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 ACTN2P35609 894 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 SPTY2D1Q68D10 685 aaPredicted RBP16.19■□□□□ 0.18
NCL-207ENST00000461347 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 HAUS4Q9H6D7 363 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 FAM207AQ9NSI2 230 aaPredicted RBP16.19■□□□□ 0.18
NCL-207ENST00000461347 TUBE1Q9UJT0 475 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 KCNJ6P48051 423 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 IFFO1Q0D2I5 559 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 CCDC43Q96MW1 224 aaKnown RBP16.19■□□□□ 0.18
NCL-207ENST00000461347 SPAG5Q96R06 1193 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 RNF26Q9BY78 433 aaPredicted RBP16.19■□□□□ 0.18
NCL-207ENST00000461347 FAM204AQ9H8W3 233 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 LY9Q9HBG7 655 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 HPS5Q9UPZ3 1129 aa16.19■□□□□ 0.18
NCL-207ENST00000461347 IPO4Q8TEX9 1081 aaKnown RBP16.18■□□□□ 0.18
NCL-207ENST00000461347 PANX2Q96RD6 677 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 ANKRD65E5RJM6 399 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 MFAP3LO75121 409 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 ATP2C2O75185 946 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 PRPF4BQ13523 1007 aaKnown RBP16.18■□□□□ 0.18
NCL-207ENST00000461347 USP49Q70CQ1 688 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 EXOC4Q96A65 974 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 PAGE5Q96GU1 130 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 CYP2D7A0A087X1C5 515 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 MPHOSPH10O00566 681 aaKnown RBP16.18■□□□□ 0.18
NCL-207ENST00000461347 GTPBP6O43824 516 aaPredicted RBP16.18■□□□□ 0.18
NCL-207ENST00000461347 BAG3O95817 575 aa16.18■□□□□ 0.18
NCL-207ENST00000461347 RPN1P04843 607 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms