RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 LOC100996750A0A140TA64 210 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 J3QW42 95 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 CHL1O00533 1208 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 FBXO24O75426 580 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 ZNF853P0CG23 659 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 EIF4A1P60842 406 aaKnown RBP10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 LMOD3Q0VAK6 560 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 GNL2Q13823 731 aaKnown RBP10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 CCDC85BQ15834 202 aaPredicted RBP10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 SPRED3Q2MJR0 410 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 SYT9Q86SS6 491 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 COL23A1Q86Y22 540 aaPredicted RBP10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 NXPE3Q969Y0 559 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 KRTAP4-6Q9BYQ5 205 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 TANGO6Q9C0B7 1094 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 RASSF4Q9H2L5 321 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 DNAJB12Q9NXW2 375 aaKnown RBP10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 PRKAG2Q9UGJ0 569 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 USP16Q9Y5T5 823 aa10.4□□□□□ -0.74
ECHDC1-212ENST00000461239 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 CNTNAP4Q9C0A0 1308 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 CRKLP46109 303 aaKnown RBP10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 GJA8P48165 433 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 ATP11AP98196 1134 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 HFE2Q6ZVN8 426 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 TTC5Q8N0Z6 440 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 SPACA7Q96KW9 195 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 PBX4Q9BYU1 374 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 TFCP2L1Q9NZI6 479 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 PRR12Q9ULL5 1215 aa10.39□□□□□ -0.75
ECHDC1-212ENST00000461239 UBR3Q6ZT12 1888 aa10.38□□□□□ -0.75
ECHDC1-212ENST00000461239 SIN3BO75182 1162 aa10.38□□□□□ -0.75
ECHDC1-212ENST00000461239 KRT24Q2M2I5 525 aa10.38□□□□□ -0.75
ECHDC1-212ENST00000461239 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
ECHDC1-212ENST00000461239 SV2BQ7L1I2 683 aa10.38□□□□□ -0.75
ECHDC1-212ENST00000461239 QSER1Q2KHR3 1735 aa10.38□□□□□ -0.75
ECHDC1-212ENST00000461239 ZNF521Q96K83 1311 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 A0A096LPE4 126 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 A0A1W2PPZ6 126 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 PDE2AO00408 941 aaPredicted RBP10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 RPS6KA4O75676 772 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 A1BGP04217 495 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 PAK2Q13177 524 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 TPTE2Q6XPS3 522 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 UBE2OQ9C0C9 1292 aaKnown RBP10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 ZFYVE1Q9HBF4 777 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 BABAM1Q9NWV8 329 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 TSPYL4Q9UJ04 414 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 ZBTB1Q9Y2K1 713 aa10.37□□□□□ -0.75
ECHDC1-212ENST00000461239 ZBTB7AO95365 584 aa10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 SNRPA1P09661 255 aaKnown RBP10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 DNAJA1P31689 397 aaKnown RBP10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 PCSK7Q16549 785 aa10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 TNFRSF25Q93038 417 aa10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 ZNF576Q9H609 170 aa10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 IGFLR1Q9H665 355 aa10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 AVENQ9NQS1 362 aaPredicted RBP10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 ADAMTS1Q9UHI8 967 aa10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 LAS1LQ9Y4W2 734 aaKnown RBP10.36□□□□□ -0.75
ECHDC1-212ENST00000461239 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 F6X3S4 739 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 CELA3AP09093 270 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 BMP4P12644 408 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 PIP4K2AP48426 406 aaPredicted RBP10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 PCBP4P57723 403 aaKnown RBP10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 PWP1Q13610 501 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 TMEM74Q96NL1 305 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 POP1Q99575 1024 aaKnown RBP10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 MDFIQ99750 246 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 KLF15Q9UIH9 416 aa10.35□□□□□ -0.75
ECHDC1-212ENST00000461239 ENC1O14682 589 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 GHRHP01286 108 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 EIF5P55010 431 aaKnown RBP10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 ARID5AQ03989 594 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 TBC1D8BQ0IIM8 1120 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 FAAP100Q0VG06 881 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 GAS6Q14393 721 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 RPS26P11Q5JNZ5 115 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 ADAMTSL4Q6UY14 1074 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 RELL1Q8IUW5 271 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 GPRASP2Q96D09 838 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 RHOVQ96L33 236 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 NECAB3Q96P71 396 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 CEP44Q9C0F1 390 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 SEC31BQ9NQW1 1179 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 NAGPAQ9UK23 515 aa10.34□□□□□ -0.75
ECHDC1-212ENST00000461239 COL24A1Q17RW2 1714 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 STARD3NLO95772 234 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 RLBP1P12271 317 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 EIF2AK2P19525 551 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 CANXP27824 592 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 GNAI1P63096 354 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 MAP3K11Q16584 847 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms