RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 MMEL1Q495T6 779 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 MCTP2Q6DN12 878 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 GOLGA5Q8TBA6 731 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 CDKL2Q92772 493 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 TRIM4Q9C037 500 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 NFE2L3Q9Y4A8 694 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 SART1O43290 800 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 TNNI1P19237 187 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 LMNB1P20700 586 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 ADCY8P40145 1251 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 TRIM68Q6AZZ1 485 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 TSC1Q92574 1164 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 MED10Q9BTT4 135 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 TRIM35Q9UPQ4 493 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 ORC6Q9Y5N6 252 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 H0YCG3 227 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 NR1I2O75469 434 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 ZNF202O95125 648 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 ATP6V1E1P36543 226 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 RNASELQ05823 741 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 PUM3Q15397 648 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 HELBQ8NG08 1087 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 U2AF1L4Q8WU68 220 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 SPDL1Q96EA4 605 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 C14orf93Q9H972 538 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 GINS2Q9Y248 185 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 MRC2Q9UBG0 1479 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 HSPA8P11142 646 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 IL2RBP14784 551 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 POLR2BP30876 1174 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 SPOUT1Q5T280 376 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 RRAGAQ7L523 313 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 NLRX1Q86UT6 975 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 HDAC11Q96DB2 347 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 LSM14BQ9BX40 385 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 KIF14Q15058 1648 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 SLC27A2O14975 620 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 HIBADHP31937 336 aaKnown RBP9.89□□□□□ -0.83
BRCA1-205ENST00000461221 LONRF3Q496Y0 759 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 PARP10Q53GL7 1025 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 WDR7Q9Y4E6 1490 aa9.89□□□□□ -0.83
BRCA1-205ENST00000461221 DDX39AO00148 427 aaKnown RBP9.88□□□□□ -0.83
BRCA1-205ENST00000461221 KRIT1O00522 736 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 SERPINB6P35237 376 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 ASPHQ12797 758 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 ARHGAP44Q17R89 818 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 DYMQ7RTS9 669 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 RAB44Q7Z6P3 723 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-205ENST00000461221 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 TFCP2L1Q9NZI6 479 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 TPCN1Q9ULQ1 816 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 LRRD1A4D1F6 860 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 MX2P20592 715 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 PRPSAP1Q14558 356 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 AP1ARQ63HQ0 302 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 MAEAQ7L5Y9 396 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 PLEKHM2Q8IWE5 1019 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 NELFCDQ8IXH7 590 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 DEPTORQ8TB45 409 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 SEPT8Q92599 483 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 APPBP2Q92624 585 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 PCDHB13Q9Y5F0 798 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 ASXL1Q8IXJ9 1541 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 ADGRL1O94910 1474 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 IBTKQ9P2D0 1353 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-205ENST00000461221 TNNC2P02585 160 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 MTX1Q13505 466 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 RINT1Q6NUQ1 792 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 TRIM42Q8IWZ5 723 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 C8orf58Q8NAV2 365 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 SPC25Q9HBM1 224 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 EIF3CLB5ME19 914 aaKnown RBP9.88□□□□□ -0.83
BRCA1-205ENST00000461221 CAPN9O14815 690 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 THAP12O43422 761 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 GPC4O75487 556 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 UFL1O94874 794 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 STX1BP61266 288 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 ZSCAN26Q16670 478 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 LRRC8CQ8TDW0 803 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 PSMB7Q99436 277 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 EIF3CQ99613 913 aaKnown RBP9.88□□□□□ -0.83
BRCA1-205ENST00000461221 EPS15L1Q9UBC2 864 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 CD109Q6YHK3 1445 aa9.88□□□□□ -0.83
BRCA1-205ENST00000461221 ATF2P15336 505 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 SLC1A4P43007 532 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 RASIP1Q5U651 963 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 ZBTB8OSQ8IWT0 167 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 BICC1Q9H694 974 aaKnown RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 PALM3A6NDB9 673 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 IFNB1P01574 187 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 XRCC5P13010 732 aaKnown RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 SNCBQ16143 134 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 CAPS2Q9BXY5 557 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms